RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 POLE4Q9NR33 117 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 NDRG4Q9ULP0 352 aaKnown RBP13.1□□□□□ -0.31
TRA2A-203ENST00000448549 PCDHGB1Q9Y5G3 927 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
TRA2A-203ENST00000448549 LOC100653049A0A140TA62 436 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 EFCAB9A8MZ26 197 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 KRT34O76011 436 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 GSTM3P21266 225 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 IFNA8P32881 189 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 SLC6A9P48067 706 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 ZNF154Q13106 437 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 KLF10Q13118 480 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 ARMCX4Q5H9R4 360 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 Q6ZR03 302 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 OAFQ86UD1 273 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 LRRC28Q86X40 367 aaPredicted RBP13.09□□□□□ -0.31
TRA2A-203ENST00000448549 BCL6BQ8N143 479 aaPredicted RBP13.09□□□□□ -0.31
TRA2A-203ENST00000448549 SPICQ8N5J4 248 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 OR2T12Q8NG77 320 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 OR13C2Q8NGS9 318 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 POP5Q969H6 163 aaKnown RBP13.09□□□□□ -0.31
TRA2A-203ENST00000448549 CMBLQ96DG6 245 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 SAMD8Q96LT4 415 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 DUX5Q96PT3 197 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 PATZ1Q9HBE1 687 aaKnown RBP13.09□□□□□ -0.31
TRA2A-203ENST00000448549 MAN2C1Q9NTJ4 1040 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 TBCCD1Q9NVR7 557 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 ZNF69Q9UC07 566 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 NUP50Q9UKX7 468 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 AUP1Q9Y679 476 aa13.09□□□□□ -0.31
TRA2A-203ENST00000448549 FAM220BPB1ANY3 271 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 J3KTA2 159 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 DOK2O60496 412 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 HKR1P10072 659 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 COX5BP10606 129 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 TNFRSF1AP19438 455 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 TNFSF4P23510 183 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 HTR5AP47898 357 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 BTG1P62324 171 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 PRKCDQ05655 676 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 SF3A3Q12874 501 aaKnown RBP eCLIP13.08□□□□□ -0.321e-9■□□□□ 8.3
TRA2A-203ENST00000448549 FOXL1Q12952 345 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 ZMYND11Q15326 602 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 TUSC1Q2TAM9 212 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 TMEM155Q4W5P6 130 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
TRA2A-203ENST00000448549 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 NPEPL1Q8NDH3 523 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 ZNF747Q9BV97 191 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 FNDC11Q9BVV2 318 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 GRHPRQ9UBQ7 328 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
TRA2A-203ENST00000448549 STARD10Q9Y365 291 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 ADAM18Q9Y3Q7 739 aa13.08□□□□□ -0.32
TRA2A-203ENST00000448549 ELOVL7A1L3X0 281 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 BBIP1A8MTZ0 92 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 FFAR1O14842 300 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 TMPRSS2O15393 492 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 SGCEO43556 437 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 ZNF12P17014 697 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 KITLGP21583 273 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 TUBG1P23258 451 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 PRTN3P24158 256 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 RPL4P36578 427 aaKnown RBP13.07□□□□□ -0.32
TRA2A-203ENST00000448549 ERFP50548 548 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 SCRN3Q0VDG4 424 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 TRAM2Q15035 370 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 ANKDD1AQ495B1 522 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 TBPL2Q6SJ96 375 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 DOK3Q7L591 496 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 VASH1Q7L8A9 365 aaPredicted RBP13.07□□□□□ -0.32
TRA2A-203ENST00000448549 VTCN1Q7Z7D3 282 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 OFCC1Q8IZS5 231 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 ITLN1Q8WWA0 313 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 LZICQ8WZA0 190 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 SLC7A6Q92536 515 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 Q96M85 177 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 SIGLEC11Q96RL6 698 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 WACQ9BTA9 647 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 SAR1AQ9NR31 198 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 TUBG2Q9NRH3 451 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 GID8Q9NWU2 228 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 PLEK2Q9NYT0 353 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
TRA2A-203ENST00000448549 IL19Q9UHD0 177 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
TRA2A-203ENST00000448549 MEGF8Q7Z7M0 2845 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 A0A087WUU8 490 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 DNAJC9-AS1A6NH13 148 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 CDC42EP2O14613 210 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 KCNAB3O43448 404 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 IFNW1P05000 195 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 ZNF26P17031 533 aaPredicted RBP13.06□□□□□ -0.32
TRA2A-203ENST00000448549 GPR4P46093 362 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 SLC9A3P48764 834 aa13.06□□□□□ -0.32
TRA2A-203ENST00000448549 BAMBIQ13145 260 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms