RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 CANT1Q8WVQ1 401 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 MARS2Q96GW9 593 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 SNX18Q96RF0 628 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 PIMREGQ9BSJ6 248 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 CHID1Q9BWS9 393 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 REEP1Q9H902 201 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 IL20Q9NYY1 176 aa10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 SAMHD1Q9Y3Z3 626 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-203ENST00000448428 ZANQ9Y493 2812 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 FN1P02751 2386 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 OR6C68A6NDL8 312 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 AQP12BA6NM10 295 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 BHLHE40O14503 412 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 SGCEO43556 437 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 ICMTO60725 284 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 IGHV3-13P01766 116 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 HPXP02790 462 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 COX5BP10606 129 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 COL8A2P25067 703 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 PPP1CBP62140 327 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 AQP6Q13520 282 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 GGTLC2Q14390 218 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 MEP1BQ16820 701 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 NKPD1Q17RQ9 610 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF718Q3SXZ3 478 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 DNAL1Q4LDG9 190 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 CCDC92Q53HC0 331 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 TMEM255AQ5JRV8 349 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 ZNF362Q5T0B9 420 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 SPATA46Q5T0L3 261 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 RPL13AP3Q6NVV1 102 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 RASSF6Q6ZTQ3 369 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 VASH1Q7L8A9 365 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 ZBTB46Q86UZ6 589 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 AQP12AQ8IXF9 295 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 AQP11Q8NBQ7 271 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 NPEPL1Q8NDH3 523 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 OR52E2Q8NGJ4 325 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 OR8D4Q8NGM9 314 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 SLC25A40Q8TBP6 338 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 C4orf45Q96LM5 186 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 DDOQ99489 341 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 PLA2G12AQ9BZM1 189 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 BPESC1Q9GZL8 116 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 FN3KQ9H479 309 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 YAE1D1Q9NRH1 226 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 SLCO1C1Q9NYB5 712 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 ASH2LQ9UBL3 628 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 CDH10Q9Y6N8 788 aa10.9□□□□□ -0.66
PRPF40A-203ENST00000448428 IGHV4-61A0A0C4DH41 118 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 RER1O15258 196 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 GSC2O15499 205 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 TLX2O43763 284 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 DOK2O60496 412 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 CST1P01037 141 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 TFP02787 698 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 GAAP10253 952 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 MPV17P39210 176 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 HTR5AP47898 357 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 HIST1H3AP68431 136 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 PPP2R2BQ00005 443 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 BNIP1Q12981 228 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 RIN1Q13671 783 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 ELFN2Q5R3F8 820 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 HIST2H3PS2Q5TEC6 136 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 DNM1P34Q6PK57 102 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 UNQ6126/PRO20091Q6UXV3 157 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 RFPL4BQ6ZWI9 263 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 HIST2H3AQ71DI3 136 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 C1orf174Q8IYL3 243 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 ZNF540Q8NDQ6 660 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 SDR9C7Q8NEX9 313 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 SLC26A10Q8NG04 563 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 OR52L1Q8NGH7 329 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 ABHD4Q8TB40 342 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 KLF14Q8TD94 323 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 SLC7A6Q92536 515 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 GTF3AQ92664 365 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 DGCR6LQ9BY27 220 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 OR2J1Q9GZK6 312 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 RACGAP1Q9H0H5 632 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 ELOVL3Q9HB03 270 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 HINT3Q9NQE9 182 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 PLEK2Q9NYT0 353 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 GPR160Q9UJ42 338 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 NDRG4Q9ULP0 352 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 POMPQ9Y244 141 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 LHFPL6Q9Y693 200 aa10.89□□□□□ -0.67
PRPF40A-203ENST00000448428 DHRS12A0PJE2 317 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 OR6C6A6NF89 314 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 C17orf100A8MU93 164 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 NCR1O76036 304 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 IGHV4-31P0DP07 118 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 GSTM3P21266 225 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 GCH1P30793 250 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 MAGEB1P43366 347 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms