RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ZNF786Q8N393 782 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 RFLNBQ8N5W9 214 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 OR52I1Q8NGK6 324 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 OR2AJ1Q8NGZ0 328 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 GGHQ92820 318 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 AMELYQ99218 206 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 OR2H1Q9GZK4 316 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 WNT5BQ9H1J7 359 aa15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 FASNP49327 2511 aaKnown RBP15.68■□□□□ 0.1
TRAPPC4-203ENST00000447216 GCN1Q92616 2671 aaKnown RBP15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 PRSS44E7EML9 344 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 CELA3BP08861 270 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 PPP3CBP16298 524 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 ZNF83P51522 516 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 PCBD1P61457 104 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 PSG4Q00888 419 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 POU4F2Q12837 409 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 RAB39AQ14964 217 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 CCDC92Q53HC0 331 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 PABPC1L2AQ5JQF8 200 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 SPATC1Q76KD6 591 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 MYPOPQ86VE0 399 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 OR10H4Q8NGA5 316 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 OTOSQ8NHW6 89 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 HSD17B8Q92506 261 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 SGCDQ92629 289 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 MAP6Q96JE9 813 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 YIPF3Q9GZM5 350 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 OBP2BQ9NPH6 170 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 PLCXD1Q9NUJ7 323 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 NPAP1Q9NZP6 1156 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 EXOGQ9Y2C4 368 aaKnown RBP15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 MYRFQ9Y2G1 1151 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 TIMM10BQ9Y5J6 103 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 PKDREJQ9NTG1 2253 aa15.67■□□□□ 0.1
TRAPPC4-203ENST00000447216 DOK2O60496 412 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 TMCC2O75069 709 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 RAB36O95755 333 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 CLDN1O95832 211 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 ADRA2AP08913 450 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 ARR3P36575 388 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 IDH3GP51553 393 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 HIST1H3AP68431 136 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 SCRN3Q0VDG4 424 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 HIST2H3PS2Q5TEC6 136 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 SEZ6L2Q6UXD5 910 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 AHSA2Q719I0 299 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 HIST2H3AQ71DI3 136 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 DPPA2Q7Z7J5 298 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 SYT9Q86SS6 491 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 OR10S1Q8NGN2 331 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 ST7LQ8TDW4 575 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 THEM6Q8WUY1 208 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 MS4A3Q96HJ5 214 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 ZNF75AQ96N20 296 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 USB1Q9BQ65 265 aaKnown RBP15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 ABHD6Q9BV23 337 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 MRPS18AQ9NVS2 196 aaKnown RBP15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 NDRG3Q9UGV2 375 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 PSORS1C1Q9UIG5 152 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 LAMP5Q9UJQ1 280 aa15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 KLF2Q9Y5W3 355 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC4-203ENST00000447216 UTP20O75691 2785 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 TUBAL3A6NHL2 446 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 PRR32B1ATL7 298 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 PTGES3LE9PB15 166 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 ZNF670-ZNF695F2Z2N8 137 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 J3QRE1 110 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 M0R1B8 84 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 SGCEO43556 437 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 CBR1P16152 277 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 ALOX5APP20292 161 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 APEX1P27695 318 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 CXCR4P61073 352 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 MVKQ03426 396 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 RAB40BQ12829 278 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 KLHL22Q53GT1 634 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 VASH1Q7L8A9 365 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 SSX6Q7RTT6 188 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 ZNF540Q8NDQ6 660 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 CPEB3Q8NE35 698 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 GJC3Q8NFK1 279 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 C1orf198Q9H425 327 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 PNRC2Q9NPJ4 139 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 CENPMQ9NSP4 180 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 PAK1IP1Q9NWT1 392 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 SCN3BQ9NY72 215 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 PLEK2Q9NYT0 353 aa15.65■□□□□ 0.1
TRAPPC4-203ENST00000447216 A0A1W2PQL4 384 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 EFCAB10A6NFE3 127 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 PSMD9O00233 223 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 MAGEB4O15481 346 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 LYNP07948 512 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 OR2T7P0C7T2 308 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 HTR5AP47898 357 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 ZNF85Q03923 595 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 ST3GAL4Q11206 333 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 RAB35Q15286 201 aa15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 RBM48Q5RL73 367 aaKnown RBP15.64■□□□□ 0.09
TRAPPC4-203ENST00000447216 MEX3BQ6ZN04 569 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms