RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 ACVR1BP36896 505 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 FRKP42685 505 aaPredicted RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 MELKQ14680 651 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 MAD2L1BPQ15013 274 aaPredicted RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 EBPQ15125 230 aaKnown RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 RHEBQ15382 184 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 NTRK2Q16620 822 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 TAZQ16635 292 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 RAB6CQ53S08 254 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 C9orf50Q5SZB4 431 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 SUSD4Q5VX71 490 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 NPNTQ6UXI9 565 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 TMEM182Q6ZP80 229 aaPredicted RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 TMEM183AQ8IXX5 376 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 CADM4Q8NFZ8 388 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 SLC7A13Q8TCU3 470 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 TNFAIP8L1Q8WVP5 186 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 FAM151AQ8WW52 585 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 FAM3CQ92520 227 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 LENG9Q96B70 501 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 LOXL4Q96JB6 756 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 COPS8Q99627 209 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 RHNO1Q9BSD3 238 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 RAB6CQ9H0N0 254 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 MARCH5Q9NX47 278 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 P2RX2Q9UBL9 471 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 B3GALT1Q9Y5Z6 326 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 COL5A3P25940 1745 aaPredicted RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 H0Y980 276 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 NME4O00746 187 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 DUSP11O75319 330 aaKnown RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 PGA3P0DJD8 388 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 SLC6A11P48066 632 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 TAF6P49848 677 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 GNMTQ14749 295 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 TCTN1Q2MV58 587 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 SLC8B1Q6J4K2 584 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 TMEM91Q6ZNR0 172 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 MRGPRGQ86SM5 289 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 SIRT6Q8N6T7 355 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 RNF152Q8N8N0 203 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 BOLLQ8N9W6 283 aaKnown RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 SLC38A9Q8NBW4 561 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 OR4D9Q8NGE8 314 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 OR1N2Q8NGR9 330 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 OR56B4Q8NH76 319 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 NETO1Q8TDF5 533 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 NKX3-1Q99801 234 aaPredicted RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 MRPL57Q9BQC6 102 aaKnown RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 SYT11Q9BT88 431 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 BOLA2Q9H3K6 86 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 RAB18Q9NP72 206 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 OR5AC2Q9NZP5 309 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 MRPL27Q9P0M9 148 aaKnown RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 IKZF2Q9UKS7 526 aa7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 C14orf166Q9Y224 244 aaKnown RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 POLR3KQ9Y2Y1 108 aaPredicted RBP7.82□□□□□ -1.16
MCF2L2-203ENST00000447025 COL4A1P02462 1669 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 DOCK2Q92608 1830 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 SCN9AQ15858 1988 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 TCRBV9S1A1TA0A576 114 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 IGSF23A1L1A6 192 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 TMEM213A2RRL7 107 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 TNFRSF13BO14836 293 aaPredicted RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 PCDH7O60245 1069 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 S1PR2O95136 353 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 C4BPAP04003 597 aaKnown RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 SEMG1P04279 462 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 ADRA2AP08913 450 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 ANKRD34CP0C6C1 535 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 SFTA3P0C7M3 94 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 PET100P0DJ07 73 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 PSMA1P25786 263 aaKnown RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 SOX3P41225 446 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 RAB38P57729 211 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 TMEM115Q12893 351 aaPredicted RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 OR2T2Q6IF00 324 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 Q6ZPB1 254 aaPredicted RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 NIT1Q86X76 327 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 LGI3Q8N145 548 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 STPG4Q8N801 248 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 SLC30A7Q8NEW0 376 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 REPS2Q8NFH8 660 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 SUSD3Q96L08 255 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 OR6C1Q96RD1 312 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 LYSMD1Q96S90 227 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 REEP2Q9BRK0 252 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 CWH43Q9H720 699 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 PLEKHB1Q9UF11 243 aaPredicted RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 EMCNQ9ULC0 261 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 NME7Q9Y5B8 376 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 ATRNL1Q5VV63 1379 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 NUP98P52948 1817 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 ZFC3H1O60293 1989 aaKnown RBP7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 G3V3Y1 287 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 OR2F2O95006 317 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 IGFBP4P22692 258 aa7.81□□□□□ -1.16
MCF2L2-203ENST00000447025 ACP1P24666 158 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms