RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 LSM8O95777 96 aaKnown RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 TPM3P06753 285 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 HPGDP15428 266 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 NQO2P16083 231 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 IVDP26440 423 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 IL12BP29460 328 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 DEKP35659 375 aaKnown RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 GPR6P46095 362 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC26A2P50443 739 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 CCR8P51685 355 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 SUB1P53999 127 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 UCNP55089 124 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 SELENOTP62341 195 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF92Q03936 586 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ASAH1Q13510 395 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 RUNX3Q13761 415 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 COTL1Q14019 142 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 GGTLC2Q14390 218 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 PTPN20Q4JDL3 420 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF774Q6NX45 483 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 UNQ9370/PRO34162Q6UXP9 181 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF621Q6ZSS3 439 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 HIPK1Q86Z02 1210 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIR2DL5AQ8N109 375 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 SYS1Q8N2H4 156 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR51F2Q8NH61 342 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIR2DL5BQ8NHK3 375 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACOT11Q8WXI4 607 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 BAALCQ8WXS3 180 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 TFGQ92734 400 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 FRAT1Q92837 279 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 TMEM54Q969K7 222 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 CCDC124Q96CT7 223 aaKnown RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ARL5BQ96KC2 179 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 CYTH2Q99418 400 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 PSMB7Q99436 277 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 LZTS2Q9BRK4 669 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 OSBPL10Q9BXB5 764 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 FRMD8P1Q9BZ68 369 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR51J1Q9H342 316 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 GOLPH3Q9H4A6 298 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 PARVGQ9HBI0 331 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ANKHQ9HCJ1 492 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 CTPS2Q9NRF8 586 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF275Q9NSD4 429 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 CALYQ9NYX4 217 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF282Q9UDV7 671 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF256Q9Y2P7 627 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 V9GYY5 206 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 PCNTO95613 3336 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ATRNO75882 1429 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 SETD5Q9C0A6 1442 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF318Q5VUA4 2279 aa3.35□□□□□ -1.87
HMGB1P48-201ENST00000446155 MAP3K1Q13233 1512 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CROCCQ5TZA2 2017 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 IQGAP1P46940 1657 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 PHLPP1O60346 1717 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 F6UB75 175 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 TBL1XO60907 577 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 FKBP6O75344 327 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 MPDU1O75352 247 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CT45A6P0DMU7 189 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CT45A5P0DMU8 189 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CT45A7P0DMV0 189 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 BGNP21810 368 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 HTR2CP28335 458 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 GLP1RP43220 463 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 RORCP51449 518 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CLDN6P56747 220 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC25A11Q02978 314 aaKnown RBP3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 STX3Q13277 289 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 ATP6AP1Q15904 470 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF239Q16600 458 aaKnown RBP3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CT45A1Q5HYN5 189 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 UTF1Q5T230 341 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CNIH2Q6PI25 160 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 TMPRSS11AQ6ZMR5 421 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 NAXDQ8IW45 347 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 KIF2BQ8N4N8 673 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF740Q8NDX6 193 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CT45A3Q8NHU0 189 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 ITFG1Q8TB96 612 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACER1Q8TDN7 264 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 NDRG1Q92597 394 aaKnown RBP3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 CPB2Q96IY4 423 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 MCUBQ9NWR8 336 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 QPCTLQ9NXS2 382 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 UBAP1Q9NZ09 502 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF581Q9P0T4 197 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 ENPP5Q9UJA9 477 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 POFUT2Q9Y2G5 429 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 UGT2A1Q9Y4X1 527 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 FLVCR1Q9Y5Y0 555 aa3.34□□□□□ -1.87
HMGB1P48-201ENST00000446155 RLFQ13129 1914 aa3.34□□□□□ -1.88
HMGB1P48-201ENST00000446155 PZPP20742 1482 aa3.34□□□□□ -1.88
HMGB1P48-201ENST00000446155 PRDM15P57071 1507 aaPredicted RBP3.34□□□□□ -1.88
HMGB1P48-201ENST00000446155 POLR1AO95602 1720 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 IGHV3-35A0A0C4DH35 117 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms