RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FAM46BQ96A09 425 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 IP6K3Q96PC2 410 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 ELOVL3Q9HB03 270 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 OR5AC2Q9NZP5 309 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 DTX4Q9Y2E6 619 aa12.58□□□□□ -0.4
VPS52-212ENST00000445902 FBXO24O75426 580 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 RDH16O75452 317 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 PNPP00491 289 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 AK1P00568 194 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 KLK3P07288 261 aaPredicted RBP12.57□□□□□ -0.4
VPS52-212ENST00000445902 OR8U8P0C7N1 319 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 FOLR2P14207 255 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 FOSL1P15407 271 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 TSFMP43897 325 aaKnown RBP12.57□□□□□ -0.4
VPS52-212ENST00000445902 PPICP45877 212 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 ITPRIPL2Q3MIP1 535 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 ZNF425Q6IV72 752 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 ADAM5Q6NVV9 412 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 LINC00114Q6XXX2 140 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 TRAPPC6BQ86SZ2 158 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 PPP1R3BQ86XI6 285 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 C15orf54Q8N8G6 183 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 CISD3P0C7P0 127 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 HRH1P35367 487 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 CCR4P51679 360 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 SCAND1P57086 179 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 MEP1BQ16820 701 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 OR2B11Q5JQS5 317 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 MDGA2Q7Z553 956 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 FJX1Q86VR8 437 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 ZNF563Q8TA94 476 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 LRRC3BQ96PB8 259 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 PFDN5Q99471 154 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 RANBP2P49792 3224 aaKnown RBP12.57□□□□□ -0.4
VPS52-212ENST00000445902 MOSPD3O75425 235 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 PI3P19957 117 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 HGFACQ04756 655 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 EBPQ15125 230 aaKnown RBP12.57□□□□□ -0.4
VPS52-212ENST00000445902 SLC9A3R2Q15599 337 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 ZNF77Q15935 545 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 ALG11Q2TAA5 492 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 PRICKLE4Q2TBC4 344 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 HNRNPA1L2Q32P51 320 aaKnown RBP12.57□□□□□ -0.4
VPS52-212ENST00000445902 ALG10Q5BKT4 473 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 TMEM225Q6GV28 225 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 ABHD13Q7L211 337 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 OR51F2Q8NH61 342 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 MRPL38Q96DV4 380 aaKnown RBP12.57□□□□□ -0.4
VPS52-212ENST00000445902 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 STACQ99469 402 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 MAP3K3Q99759 626 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 FBXL21Q9UKT6 434 aa12.57□□□□□ -0.4
VPS52-212ENST00000445902 M0R036 132 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 HRKO00198 91 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 MBTPS2O43462 519 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 CTSVO60911 334 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 ARG1P05089 322 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 PRF1P14222 555 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 ALOX5APP20292 161 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 SSBP1Q04837 148 aaKnown RBP12.56□□□□□ -0.4
VPS52-212ENST00000445902 ELAVL3Q14576 367 aaKnown RBP12.56□□□□□ -0.4
VPS52-212ENST00000445902 CLINT1Q14677 625 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 TMEM52BQ4KMG9 183 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 CSNK1A1LQ8N752 337 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 WDSUB1Q8N9V3 476 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 FN3KRPQ9HA64 309 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 MYOZ1Q9NP98 299 aaPredicted RBP12.56□□□□□ -0.4
VPS52-212ENST00000445902 A0A087WUJ7 227 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 ZNF432O94892 652 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 PMP2P02689 132 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 ADH5P11766 374 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 GRK6P43250 576 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 PSG6Q00889 435 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
VPS52-212ENST00000445902 RASGEF1BQ0VAM2 473 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 TDGQ13569 410 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 SGCAQ16586 387 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 CDPF1Q6NVV7 123 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 FBXO42Q6P3S6 717 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 SAMD14Q8IZD0 417 aaPredicted RBP12.56□□□□□ -0.4
VPS52-212ENST00000445902 ZNF561Q8N587 486 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 LCN9Q8WX39 176 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 CYYR1Q96J86 154 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 PRRT1Q99946 306 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 GRHPRQ9UBQ7 328 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 DHDHQ9UQ10 334 aa12.56□□□□□ -0.4
VPS52-212ENST00000445902 WIPF3A6NGB9 483 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 SOX1O00570 391 aaPredicted RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 EFSO43281 561 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 CSTAP01040 98 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 RNF224P0DH78 156 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 WASP42768 502 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 HTRA3P83110 453 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 AWAT1Q58HT5 328 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 MESTQ5EB52 335 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 RPL7L1Q6DKI1 246 aaKnown RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 FAM24BQ8N5W8 94 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms