RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 CYP2R1Q6VVX0 501 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 PTCHD4Q6ZW05 846 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 DHFR2Q86XF0 187 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 GNPDA2Q8TDQ7 276 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 C4orf45Q96LM5 186 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 ERMAPQ96PL5 475 aaPredicted RBP16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 NUAK2Q9H093 628 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 TBCCD1Q9NVR7 557 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 FAM53CQ9NYF3 392 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 CGGBP1Q9UFW8 167 aaPredicted RBP16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 CDC42EP3Q9UKI2 254 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 COA3Q9Y2R0 106 aaPredicted RBP16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 LYVE1Q9Y5Y7 322 aa16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 CHD3Q12873 2000 aaKnown RBP16.1■□□□□ 0.17
ATPAF2-201ENST00000444058 TCRBV5S2A0A599 114 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 SGCEO43556 437 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 PPP1R3DO95685 299 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 LIPAP38571 399 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 ARHGDIAP52565 204 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 RPL13AP3Q6NVV1 102 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 PGBD2Q6P3X8 592 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 ICA1LQ8NDH6 482 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 KLF14Q8TD94 323 aaPredicted RBP16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 MSI2Q96DH6 328 aaKnown RBP16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 CYSLTR2Q9NS75 346 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 LPAR3Q9UBY5 353 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 ATPIF1Q9UII2 106 aa16.09■□□□□ 0.17
ATPAF2-201ENST00000444058 LMX1BO60663 402 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 ZNF16P17020 682 aaPredicted RBP16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 COL8A2P25067 703 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 PPP1CBP62140 327 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 FAM209AQ5JX71 171 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 FAM166AQ6J272 317 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 ZNF620Q6ZNG0 422 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 RFPL4BQ6ZWI9 263 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 VASH1Q7L8A9 365 aaPredicted RBP16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 ABHD4Q8TB40 342 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 SLC25A40Q8TBP6 338 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 ASB9Q96DX5 294 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 C1orf159Q96HA4 380 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 COG8Q96MW5 612 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 IFT27Q9BW83 186 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 OR2J1Q9GZK6 312 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 RACGAP1Q9H0H5 632 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 PLEK2Q9NYT0 353 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 TAS2R1Q9NYW7 299 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 ASH2LQ9UBL3 628 aa16.08■□□□□ 0.16
ATPAF2-201ENST00000444058 LOC100289279A0A1B0GTE1 492 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 LYNX1G3V0Z9 82 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 J3QW42 95 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 TNFRSF11BO00300 401 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 DOK2O60496 412 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 RP2O75695 350 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 NCR1O76036 304 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 RENP00797 406 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 NGFP01138 241 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 ADH4P08319 380 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 LYNX1P0DP58 116 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 NOS3P29474 1203 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 MAGEB1P43366 347 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 MMP15P51511 669 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 MS4A2Q01362 244 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 TEKQ02763 1124 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 GLO1Q04760 184 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 GK3PQ14409 553 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 ZNF770Q6IQ21 691 aaPredicted RBP16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 ZBTB46Q86UZ6 589 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 JAZF1Q86VZ6 243 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 NPEPL1Q8NDH3 523 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 OR4C15Q8NGM1 316 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 IPCEF1Q8WWN9 437 aaPredicted RBP16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 SAMD8Q96LT4 415 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 NMNAT3Q96T66 252 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 RERGLQ9H628 205 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 IL20Q9NYY1 176 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 KCNS2Q9ULS6 477 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 B9D1Q9UPM9 204 aa16.07■□□□□ 0.16
ATPAF2-201ENST00000444058 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 IGLV1-36A0A0B4J1U3 117 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 PLSCR5A0PG75 271 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 LRP5LA4QPB2 252 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 OR6C6A6NF89 314 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 DCTN6O00399 190 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 ABHD16AO95870 558 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 GAAP10253 952 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 HIST1H1CP16403 213 aaKnown RBP16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 CRYBB2P43320 205 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 GPR6P46095 362 aaPredicted RBP16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 HTR5AP47898 357 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 ZNF81P51508 661 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 HIST1H3AP68431 136 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 ALKBH6Q3KRA9 238 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 FAM98BQ52LJ0 330 aaKnown RBP16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 ZMAT1Q5H9K5 638 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 HIST2H3PS2Q5TEC6 136 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 LEG1Q6P5S2 330 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 HIST2H3AQ71DI3 136 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 OR6V1Q8N148 313 aa16.06■□□□□ 0.16
ATPAF2-201ENST00000444058 GJC3Q8NFK1 279 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms