RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 OR51S1Q8NGJ8 323 aa14.32□□□□□ -0.12
SHQ1-202ENST00000444040 PMEPA1Q969W9 287 aa14.32□□□□□ -0.12
SHQ1-202ENST00000444040 WDR77Q9BQA1 342 aaPredicted RBP14.32□□□□□ -0.12
SHQ1-202ENST00000444040 CHST11Q9NPF2 352 aa14.32□□□□□ -0.12
SHQ1-202ENST00000444040 CGGBP1Q9UFW8 167 aaPredicted RBP14.32□□□□□ -0.12
SHQ1-202ENST00000444040 LOC107986453A0A1B0GWG9 222 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 LDLRAD4O15165 306 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 ALOX12BO75342 701 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 IFNA7P01567 189 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 HEXBP07686 556 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 HSF1Q00613 529 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 LRFN4Q6PJG9 635 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 OR6M1Q8NGM8 313 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 FREM3P0C091 2139 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 EFNA2O43921 213 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 GABRA1P14867 456 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 ACHEP22303 614 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 TLE3Q04726 772 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 CLLU1Q5K131 121 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 DEGS2Q6QHC5 323 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 NHLRC1Q6VVB1 395 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 OR13C3Q8NGS6 347 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 SEH1LQ96EE3 360 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 FANCFQ9NPI8 374 aa14.31□□□□□ -0.12
SHQ1-202ENST00000444040 ARID1BQ8NFD5 2236 aaPredicted RBP14.3□□□□□ -0.12
SHQ1-202ENST00000444040 LOC101059948A0A1B0GTJ6 334 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 LOC390937A0A1W2PQ73 354 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 DCDC2BA2VCK2 349 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 CXCL2P19875 107 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 ENPP1P22413 925 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 PAPD4Q6PIY7 484 aaKnown RBP14.3□□□□□ -0.12
SHQ1-202ENST00000444040 DVL3Q92997 716 aaPredicted RBP14.3□□□□□ -0.12
SHQ1-202ENST00000444040 DDIT4LQ96D03 193 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 TMPRSS13Q9BYE2 586 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 RHBDD3Q9Y3P4 386 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 TMEM269A0A1B0GVZ9 245 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 MEGF11A6BM72 1044 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 LIPT2A6NK58 231 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 SHISA8B8ZZ34 492 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 M0R233 179 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 SULT1C2O00338 296 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 LMX1BO60663 402 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 FCER2P06734 321 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 POU4F3Q15319 338 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 C2orf68Q2NKX9 166 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 WDR45BQ5MNZ6 344 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 STEAP1BQ6NZ63 245 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 TMEM205Q6UW68 189 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 FAM198BQ6UWH4 519 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 ZNF704Q6ZNC4 412 aaPredicted RBP14.3□□□□□ -0.12
SHQ1-202ENST00000444040 RNF133Q8WVZ7 376 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 OR6C1Q96RD1 312 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 UBQLN2Q9UHD9 624 aa14.3□□□□□ -0.12
SHQ1-202ENST00000444040 EXPH5Q8NEV8 1989 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 TRBV11-1A0A0K0K1C0 115 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 HRGP04196 525 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 NAGAP17050 411 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 DNASE1L1P49184 302 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 ACY1Q03154 408 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 SPOCK1Q08629 439 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 OPCMLQ14982 345 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 C1orf100Q5SVJ3 147 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 CORO6Q6QEF8 472 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 GABRG1Q8N1C3 465 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 OR8S1Q8NH09 359 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 POTEKPQ9BYX7 375 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 KLHL13Q9P2N7 655 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 H3BML4 177 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 K7ESF4 209 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 RLN1P04808 185 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 MELTFP08582 738 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 MMP16P51512 607 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 H2BFSP57053 126 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 ACTBP60709 375 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 ACTG1P63261 375 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 SQSTM1Q13501 440 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 ADGRE4PQ86SQ3 457 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 MUC20Q8N307 709 aaPredicted RBP14.29□□□□□ -0.12
SHQ1-202ENST00000444040 OR5M1Q8NGP8 315 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 B3GAT1Q9P2W7 334 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 WNT16Q9UBV4 365 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 OPN4Q9UHM6 478 aa14.29□□□□□ -0.12
SHQ1-202ENST00000444040 UBE2QL1A1L167 161 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 VSTM2BA6NLU5 285 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 LPLP06858 475 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 PTGDSP41222 190 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 TMEM244Q5VVB8 128 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 MARVELD3Q96A59 401 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 EMC6Q9BV81 110 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 CHST6Q9GZX3 395 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 SERINC1Q9NRX5 453 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 ALKBH4Q9NXW9 302 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 B3GALT5Q9Y2C3 310 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 MCRIP1C9JLW8 97 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 NFYAP23511 347 aaPredicted RBP14.28□□□□□ -0.12
SHQ1-202ENST00000444040 SLC25A53Q5H9E4 307 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 TOR2AQ5JU69 321 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 ZNF385CQ66K41 422 aaPredicted RBP14.28□□□□□ -0.12
SHQ1-202ENST00000444040 ZNF627Q7L945 461 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 TMEM229BQ8NBD8 167 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms