RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ATE1O95260 518 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 DANCRP0C864 163 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 CD53P19397 219 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 PAICSP22234 425 aaKnown RBP13.85□□□□□ -0.19
USP39-205ENST00000442708 STOMP27105 288 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 NKX6-1P78426 367 aaPredicted RBP13.85□□□□□ -0.19
USP39-205ENST00000442708 PLP2Q04941 152 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 MSMPQ1L6U9 139 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 SLC18B1Q6NT16 456 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 VASH1Q7L8A9 365 aaPredicted RBP13.85□□□□□ -0.19
USP39-205ENST00000442708 CXXC5Q7LFL8 322 aaKnown RBP13.85□□□□□ -0.19
USP39-205ENST00000442708 ZNF611Q8N823 705 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 OR6K6Q8NGW6 343 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 SLC7A6Q92536 515 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 UBE2FQ969M7 185 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 FBXW5Q969U6 566 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 ZMYND19Q96E35 227 aaPredicted RBP13.85□□□□□ -0.19
USP39-205ENST00000442708 IL4I1Q96RQ9 567 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 KCNS3Q9BQ31 491 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 MARCH7Q9H992 704 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 CYB5R1Q9UHQ9 305 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 ENOPH1Q9UHY7 261 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 POLR1DQ9Y2S0 133 aa13.85□□□□□ -0.19
USP39-205ENST00000442708 IQCMA0A1B0GVH7 501 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 CCDC182A6NF36 153 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 SGCEO43556 437 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 SYNGR3O43761 229 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 TLX2O43763 284 aaPredicted RBP13.84□□□□□ -0.19
USP39-205ENST00000442708 DOK2O60496 412 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 GLCEO94923 617 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 CD8AP01732 235 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 SOD3P08294 240 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 NR4A1P22736 598 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 FMO3P31513 532 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 RAD23AP54725 363 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 PCK2Q16822 640 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 RSPO1Q2MKA7 263 aaPredicted RBP13.84□□□□□ -0.19
USP39-205ENST00000442708 AADACL4Q5VUY2 407 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 KRT80Q6KB66 452 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 CDH24Q86UP0 819 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 DEPDC4Q8N2C3 294 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 GALNT4Q8N4A0 578 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 IL17RDQ8NFM7 739 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 OR10H5Q8NGA6 315 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 OR10S1Q8NGN2 331 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 TMEM163Q8TC26 289 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 SMAP2Q8WU79 429 aaPredicted RBP13.84□□□□□ -0.19
USP39-205ENST00000442708 MAP6Q96JE9 813 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 HRASLS5Q96KN8 279 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 DHRS9Q9BPW9 319 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 WACQ9BTA9 647 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 TEX12Q9BXU0 123 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 DCLRE1BQ9H816 532 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 PNRC2Q9NPJ4 139 aaKnown RBP13.84□□□□□ -0.19
USP39-205ENST00000442708 ORC6Q9Y5N6 252 aa13.84□□□□□ -0.19
USP39-205ENST00000442708 CREBBPQ92793 2442 aa13.83□□□□□ -0.19
USP39-205ENST00000442708 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 OR6C6A6NF89 314 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 ZNF593O00488 134 aaPredicted RBP13.83□□□□□ -0.2
USP39-205ENST00000442708 CASQ2O14958 399 aaPredicted RBP13.83□□□□□ -0.2
USP39-205ENST00000442708 GPRIN2O60269 458 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 RAF1P04049 648 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 GSTT1P30711 240 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 THBS4P35443 961 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 WNT5AP41221 380 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 ENTPD1P49961 510 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 ADAM8P78325 824 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 SCRN3Q0VDG4 424 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 APOFQ13790 326 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 KLHL12Q53G59 568 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 OGFRL1Q5TC84 451 aaPredicted RBP13.83□□□□□ -0.2
USP39-205ENST00000442708 TMEM154Q6P9G4 183 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 VHLLQ6RSH7 139 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 ZNF771Q7L3S4 317 aaPredicted RBP13.83□□□□□ -0.2
USP39-205ENST00000442708 TIGD4Q8IY51 512 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 NUP37Q8NFH4 326 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 OR4F15Q8NGB8 312 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 C1orf198Q9H425 327 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 CA10Q9NS85 328 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 PLEK2Q9NYT0 353 aa13.83□□□□□ -0.2
USP39-205ENST00000442708 GDF2Q9UK05 429 aaPredicted RBP13.83□□□□□ -0.2
USP39-205ENST00000442708 PRODHO43272 600 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 SELENOFO60613 162 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 PTHP01270 115 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 DBHP09172 617 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 SPARCP09486 303 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 FAM157BP0CG42 384 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 COX5BP10606 129 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 ZNF823P16415 610 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 CCNOP22674 350 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 APLNRP35414 380 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 HTR5AP47898 357 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 FABP6P51161 128 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 ERVS71-1P61550 626 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 SNTB2Q13425 540 aaKnown RBP13.82□□□□□ -0.2
USP39-205ENST00000442708 RAB35Q15286 201 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 ADIPOQQ15848 244 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 TBC1D28Q2M2D7 210 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 MST1LQ2TV78 715 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 TEX30Q5JUR7 227 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms