RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ZNF511Q8NB15 262 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 NUP37Q8NFH4 326 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 GJC3Q8NFK1 279 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 TMEM171Q8WVE6 324 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 MBD6Q96DN6 1003 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 OR51V1Q9H2C8 321 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 RIBC2Q9H4K1 309 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 CA10Q9NS85 328 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 MRPL22Q9NWU5 206 aaKnown RBP10.66□□□□□ -0.7
USP1-203ENST00000442679 USE1Q9NZ43 259 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 ITGB1BP2Q9UKP3 347 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 LHFPL6Q9Y693 200 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 ABCA4P78363 2273 aa10.66□□□□□ -0.7
USP1-203ENST00000442679 RER1O15258 196 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 DOK2O60496 412 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 SNAP29O95721 258 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 CD8AP01732 235 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 ANPEPP15144 967 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 GGT2P36268 569 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 BLVRAP53004 296 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 HIST1H3AP68431 136 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 ADAM8P78325 824 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 NKX6-1P78426 367 aaPredicted RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 SNTB2Q13425 540 aaKnown RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 RCN1Q15293 331 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 DEFB113Q30KQ7 82 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 CCDC92Q53HC0 331 aaPredicted RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 HIST2H3PS2Q5TEC6 136 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 CORO6Q6QEF8 472 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 LYPD4Q6UWN0 246 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 ZBTB49Q6ZSB9 765 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 HIST2H3AQ71DI3 136 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 VASH1Q7L8A9 365 aaPredicted RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 CXXC5Q7LFL8 322 aaKnown RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 LINC00346Q8IVM7 164 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 MUC15Q8N387 334 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 OR6K6Q8NGW6 343 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 OR2AJ1Q8NGZ0 328 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 IGFBPL1Q8WX77 278 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 EME1Q96AY2 570 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 POM121L2Q96KW2 1035 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 TRAF4Q9BUZ4 470 aaPredicted RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 GABARAPL3Q9BY60 117 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 PRRG3Q9BZD7 231 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 GRIP2Q9C0E4 1043 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 HINT3Q9NQE9 182 aaKnown RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 BEX4Q9NWD9 120 aaPredicted RBP10.65□□□□□ -0.7
USP1-203ENST00000442679 PLEK2Q9NYT0 353 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 CYB5R1Q9UHQ9 305 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 KCNG2Q9UJ96 466 aa10.65□□□□□ -0.7
USP1-203ENST00000442679 ZNF593O00488 134 aaPredicted RBP10.64□□□□□ -0.71
USP1-203ENST00000442679 TLX2O43763 284 aaPredicted RBP10.64□□□□□ -0.71
USP1-203ENST00000442679 PRKYO43930 277 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 SMPD2O60906 423 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 TMCC2O75069 709 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 GLCEO94923 617 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 OR4A8P0C604 315 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 FAM157BP0CG42 384 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 COX5BP10606 129 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 GSTT1P30711 240 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 GLRXP35754 106 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 SERPINF1P36955 418 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 RAD52P43351 418 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 HTR5AP47898 357 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 RAD23AP54725 363 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 UCP2P55851 309 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 ELF3P78545 371 aaPredicted RBP10.64□□□□□ -0.71
USP1-203ENST00000442679 RAB35Q15286 201 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 ADIPOQQ15848 244 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 ZIK1Q3SY52 487 aaPredicted RBP10.64□□□□□ -0.71
USP1-203ENST00000442679 KLHL12Q53G59 568 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 LINC01590Q5TEZ4 76 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 C12orf73Q69YU5 71 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 SLC18B1Q6NT16 456 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 TMEM154Q6P9G4 183 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 DTX2Q86UW9 622 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 TCEANCQ8N8B7 351 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 BBS1Q8NFJ9 593 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 OR1F12Q8NHA8 337 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 SLC29A1Q99808 456 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 OR51B6Q9H340 312 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 CXorf56Q9H5V9 222 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 ZNF442Q9H7R0 627 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 WDR76Q9H967 626 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 CBLN4Q9NTU7 201 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 EIF3KQ9UBQ5 218 aaKnown RBP10.64□□□□□ -0.71
USP1-203ENST00000442679 NDRG4Q9ULP0 352 aaKnown RBP10.64□□□□□ -0.71
USP1-203ENST00000442679 CMAHPQ9Y471 501 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 VPS13CQ709C8 3753 aa10.64□□□□□ -0.71
USP1-203ENST00000442679 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 MAST4O15021 2626 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 ANKRD17O75179 2603 aaKnown RBP10.63□□□□□ -0.71
USP1-203ENST00000442679 SPG11Q96JI7 2443 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 OR6C6A6NF89 314 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 M0R129 80 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 OVOL3O00110 214 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 PRODHO43272 600 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 SYNGR3O43761 229 aa10.63□□□□□ -0.71
USP1-203ENST00000442679 GPRIN2O60269 458 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms