RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HTR3EA5X5Y0 456 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 LILRA5A6NI73 299 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 RIIAD1A6NNX1 92 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 NPIPA7E9PJI5 369 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 H0YIG0 161 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 J3QRE1 110 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 BHLHE40O14503 412 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SOCS6O14544 535 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDC42EP2O14613 210 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CHP2O43745 196 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 NSA2O95478 260 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC2A10O95528 541 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 PTTG1O95997 202 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 IFNGP01579 166 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGKV1D-16P01601 117 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 HLA-DPB1P04440 258 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 IFNA16P05015 189 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 NPIPA8P0DM63 369 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SAGP10523 405 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 VPREB1P12018 145 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ADRA2CP18825 462 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 DNASE1P24855 282 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 GTF2E2P29084 291 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 FGF9P31371 208 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC6A6P31641 620 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 GABRA5P31644 462 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 RBM34P42696 430 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACAA2P42765 397 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CAPZBP47756 277 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 FASLGP48023 281 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 GABRA4P48169 554 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 RFX3P48380 749 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 EMDP50402 254 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ATP12AP54707 1039 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAZP56270 477 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 HSD17B7P56937 341 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 RPS25P62851 125 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 PSPHP78330 225 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 BTG2P78543 158 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAT1AQ00266 395 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 BDH1Q02338 343 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 GPR50Q13585 617 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SERTAD2Q14140 314 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM53BQ14153 422 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF141Q15928 474 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 VWC2Q2TAL6 325 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 LRIT3Q3SXY7 679 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 KLHL26Q53HC5 615 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 TCTE1Q5JU00 501 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 PDZK1Q5T2W1 519 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR2G6Q5TZ20 316 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 C22orf42Q6IC83 251 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ULK3Q6PHR2 472 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 XKRXQ6PP77 449 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SMARCD3Q6STE5 483 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 METAP1DQ6UB28 335 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMPRSS11AQ6ZMR5 421 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 LINC00696Q6ZRV3 163 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 Q6ZS52 159 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 GDPD3Q7L5L3 318 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SHFQ7M4L6 423 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 NUP54Q7Z3B4 507 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 C17orf82Q86X59 251 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 GRAMD2AQ8IUY3 354 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC43A2Q8N370 569 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 DEFB119Q8N690 84 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACBD7Q8N6N7 88 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 C10orf53Q8N6V4 93 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF614Q8N883 585 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SCCPDHQ8NBX0 429 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC37A3Q8NCC5 494 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF485Q8NCK3 441 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM83FQ8NEG4 500 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 BBS1Q8NFJ9 593 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR7G1Q8NGA0 311 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR4F15Q8NGB8 312 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR1J2Q8NGS2 313 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR52N1Q8NH53 320 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR4C6Q8NH72 309 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 LILRB1Q8NHL6 650 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 PFN4Q8NHR9 129 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 FANK1Q8TC84 345 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 GRHL3Q8TE85 626 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SECTM1Q8WVN6 248 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPRYD4Q8WW59 207 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 RLN3Q8WXF3 142 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 TM9SF4Q92544 642 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 AP3S1Q92572 193 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM203Q969S6 136 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC25A46Q96AG3 418 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 BPIFA2Q96DR5 249 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPACA9Q96E40 222 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 LRFN5Q96NI6 719 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF285Q96NJ3 590 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 TNFRSF13CQ96RJ3 184 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 CCNL2Q96S94 520 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SECISBP2Q96T21 854 aaKnown RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 ATP6V0BQ99437 205 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAP3K3Q99759 626 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 NEURL2Q9BR09 285 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms