RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 AP3S1Q92572 193 aa12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SMIM19Q96E16 107 aa12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 KCNS3Q9BQ31 491 aa12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CDADC1Q9BWV3 514 aa12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 PALMDQ9NP74 551 aa12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 AKIP1Q9NQ31 210 aa12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 Q9UFV3 132 aa12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SIRT4Q9Y6E7 314 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-204ENST00000440083 A0A075B6Q4 140 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 TRBV2A0A0J9YWF9 115 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 ZNF726A6NNF4 738 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 FAM90A27PA6NNH2 459 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 MAGEB4O15481 346 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 OGG1O15527 345 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 DNPH1O43598 174 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 GPRIN2O60269 458 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CLDN1O95832 211 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 GPANK1O95872 356 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CD1AP06126 327 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 HOXD4P09016 255 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 GAAP10253 952 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 KLK2P20151 261 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SDC2P34741 201 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 PSMB10P40306 273 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 TGM4P49221 684 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SIRPAP78324 504 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 DMKNQ6E0U4 476 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 ZNF544Q6NX49 715 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 MED12LQ86YW9 2145 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 LIX1LQ8IVB5 337 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 OR10H5Q8NGA6 315 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 OR10D3Q8NH80 312 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 FNDC9Q8TBE3 224 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 FNDC8Q8TC99 324 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 RND1Q92730 232 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SLC25A46Q96AG3 418 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 TXNDC15Q96J42 360 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 FOXN4Q96NZ1 517 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 KCNK17Q96T54 332 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SRXN1Q9BYN0 137 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 B3GAT1Q9P2W7 334 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 COA3Q9Y2R0 106 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 KLHDC2Q9Y2U9 406 aa12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 ASH1LQ9NR48 2969 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-204ENST00000440083 MBD3L4A6NDZ8 208 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 MBD3L3A6NE82 208 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 MBD3L5A6NJ08 208 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SLC22A20A6NK97 555 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 J3QRK9 145 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 PSMD9O00233 223 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 ZNF593O00488 134 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 TRAF3IP2O43734 574 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SULT1C4O75897 302 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 VAMP5O95183 116 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 BMP4P12644 408 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 P2RY4P51582 365 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 AGFG1P52594 562 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 FMODQ06828 376 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 FOXF2Q12947 444 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 PDSS1Q5T2R2 415 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 RIPPLY2Q5TAB7 128 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 HBMQ6B0K9 141 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 KCTD18Q6PI47 426 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CHMP1BQ7LBR1 199 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 DPY19L4Q7Z388 723 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CEACAM19Q7Z692 300 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 GCNT2Q8N0V5 402 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 ZNF808Q8N4W9 903 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 OR6X1Q8NH79 312 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 OTOSQ8NHW6 89 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 MBD3L2Q8NHZ7 208 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SLC25A44Q96H78 314 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 PGLYRP3Q96LB9 341 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 EMC6Q9BV81 110 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 TPK1Q9H3S4 243 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CALHM2Q9HA72 323 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 KCNG2Q9UJ96 466 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CENPEQ02224 2701 aa12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 INTS1Q8N201 2190 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-204ENST00000440083 SETXQ7Z333 2677 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 IGHV3-15A0A0B4J1V0 119 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 IQCMA0A1B0GVH7 501 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 A0A1W2PPL8 197 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 RGS5O15539 181 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 AQP8O94778 261 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 ALOX5APP20292 161 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CEACAM8P31997 349 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 MTNR1BP49286 362 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CAMK2DQ13557 499 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 THEM4Q5T1C6 240 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 CARD17Q5XLA6 110 aa12.85□□□□□ -0.35
TNFRSF1A-204ENST00000440083 HIST2H2BCQ6DN03 193 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms