RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MAD2L1BPQ15013 274 aaPredicted RBP20.29■□□□□ 0.84
VARS-217ENST00000440048 KCNMB1Q16558 191 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 ZNF101Q8IZC7 436 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 ICA1LQ8NDH6 482 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 OR10G2Q8NGC3 310 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 OR52E2Q8NGJ4 325 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 NEU4Q8WWR8 484 aaPredicted RBP20.29■□□□□ 0.84
VARS-217ENST00000440048 RPRD1BQ9NQG5 326 aaKnown RBP20.29■□□□□ 0.84
VARS-217ENST00000440048 EIF3KQ9UBQ5 218 aaKnown RBP20.29■□□□□ 0.84
VARS-217ENST00000440048 ABCA2Q9BZC7 2435 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 A0A096LNT2 108 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 OR6C68A6NDL8 312 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 CLPTM1O96005 669 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 ERCC1P07992 297 aaPredicted RBP20.28■□□□□ 0.84
VARS-217ENST00000440048 GAAP10253 952 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 GSTM3P21266 225 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 PDLIM4P50479 330 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.28■□□□□ 0.84
VARS-217ENST00000440048 AQP6Q13520 282 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 NPEPL1Q8NDH3 523 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 OR1J1Q8NGS3 322 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 SYNPRQ8TBG9 265 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 GIPC3Q8TF64 312 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 TPK1Q9H3S4 243 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 FN3KQ9H479 309 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 ASH2LQ9UBL3 628 aa20.28■□□□□ 0.84
VARS-217ENST00000440048 YLPM1P49750 1951 aaKnown RBP20.27■□□□□ 0.84
VARS-217ENST00000440048 A0A1W2PPW3 197 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 GNGT2O14610 69 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 SGCEO43556 437 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 DOK2O60496 412 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 ATP5HO75947 161 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 COX5BP10606 129 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 SLC25A16P16260 332 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 ERFP50548 548 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 RASSF2P50749 326 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 KLF3P57682 345 aaPredicted RBP20.27■□□□□ 0.84
VARS-217ENST00000440048 SELENOVP59797 346 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 VASH1Q7L8A9 365 aaPredicted RBP20.27■□□□□ 0.84
VARS-217ENST00000440048 TMEM179BQ7Z7N9 219 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 ZBTB46Q86UZ6 589 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 NIPSNAP1Q9BPW8 284 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 TSSK6Q9BXA6 273 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 RACGAP1Q9H0H5 632 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 MS4A5Q9H3V2 200 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 MYOZ1Q9NP98 299 aaPredicted RBP20.27■□□□□ 0.84
VARS-217ENST00000440048 TBC1D23Q9NUY8 699 aa20.27■□□□□ 0.84
VARS-217ENST00000440048 NDRG4Q9ULP0 352 aaKnown RBP20.27■□□□□ 0.84
VARS-217ENST00000440048 IGLV3-9A0A075B6K5 115 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 FKBP6O75344 327 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 SOX14O95416 240 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 TP53P04637 393 aaPredicted RBP20.26■□□□□ 0.83
VARS-217ENST00000440048 HTR5AP47898 357 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 KRTAP1-1Q07627 177 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 CARTPTQ16568 116 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 MEP1BQ16820 701 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.26■□□□□ 0.83
VARS-217ENST00000440048 PAPD5Q8NDF8 572 aaKnown RBP20.26■□□□□ 0.83
VARS-217ENST00000440048 SLCO4A1Q96BD0 722 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 DDOQ99489 341 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 FEVQ99581 238 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 PLEK2Q9NYT0 353 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 TAAR3PQ9P1P4 343 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 POLR1DQ9Y2S0 133 aa20.26■□□□□ 0.83
VARS-217ENST00000440048 ARRDC5A6NEK1 342 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 ICMTO60725 284 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 DAOP14920 347 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 CBX1P83916 185 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 ALKBH6Q3KRA9 238 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 CCDC92Q53HC0 331 aaPredicted RBP20.25■□□□□ 0.83
VARS-217ENST00000440048 ZNF362Q5T0B9 420 aaPredicted RBP20.25■□□□□ 0.83
VARS-217ENST00000440048 SPATA46Q5T0L3 261 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 UNQ6126/PRO20091Q6UXV3 157 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 CD300LDQ6UXZ3 194 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 RFPL4BQ6ZWI9 263 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 LNX2Q8N448 690 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 CYB561A3Q8NBI2 242 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 SLC26A10Q8NG04 563 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 OR4Q3Q8NH05 313 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 ABHD4Q8TB40 342 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 C4orf45Q96LM5 186 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 YY1AP1Q9H869 796 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 ARMC1Q9NVT9 282 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 LHFPL6Q9Y693 200 aa20.25■□□□□ 0.83
VARS-217ENST00000440048 SONP18583 2426 aaKnown RBP20.24■□□□□ 0.83
VARS-217ENST00000440048 LOC390937A0A1W2PQ73 354 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 VWC2LB2RUY7 222 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 NDUFS8O00217 210 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 RER1O15258 196 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 NGFP01138 241 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 TFP02787 698 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 NAT2P11245 290 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 TEKQ02763 1124 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 GLO1Q04760 184 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 COX10Q12887 443 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 NKPD1Q17RQ9 610 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 ZNF718Q3SXZ3 478 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 SLC25A40Q8TBP6 338 aa20.24■□□□□ 0.83
VARS-217ENST00000440048 MARS2Q96GW9 593 aaKnown RBP20.24■□□□□ 0.83
VARS-217ENST00000440048 ELOVL3Q9HB03 270 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms