RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 KCTD18Q6PI47 426 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 TTYH1Q9H313 450 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 TAS2R8Q9NYW2 309 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 TMEM269A0A1B0GVZ9 245 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 A0A1W2PPC1 479 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 hCG_1807616A0A1W2PRN6 198 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 RP2O75695 350 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 AHSA1O95433 338 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 FBLP22087 321 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 GLO1Q04760 184 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 BTN1A1Q13410 526 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 TEX30Q5JUR7 227 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 GLT8D1Q68CQ7 371 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 GVQW1Q8N7I0 195 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 OR4D6Q8NGJ1 314 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 DAZLQ92904 295 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC25A28Q96A46 364 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 SPACA5Q96QH8 159 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 UTP23Q9BRU9 249 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 MED11Q9P086 117 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 EPHA6Q9UF33 1036 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 KIF26BQ2KJY2 2108 aa12.15□□□□□ -0.47
HERPUD1-204ENST00000439977 LOC107986453A0A1B0GWG9 222 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 A8MVM7 634 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 C10orf142B7Z368 130 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 OR4E1P0C645 316 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 GNALP38405 381 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 POLR2HP52434 150 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 FAM74A1Q5RGS3 127 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 ARSKQ6UWY0 536 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 OR1J2Q8NGS2 313 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 GPX8Q8TED1 209 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 WBP1Q96G27 269 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 MFFQ9GZY8 342 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 TMEM185BQ9H7F4 350 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 LMAN1LQ9HAT1 526 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 NUP50Q9UKX7 468 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 KCNMB2Q9Y691 235 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 LILRA5A6NI73 299 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 PHYHO14832 338 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 KCNAB3O43448 404 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 PPP3CBP16298 524 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF823P16415 610 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 HSD11B2P80365 405 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 POU3F1Q03052 451 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 OR52W1Q6IF63 320 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 CATSPERDQ86XM0 798 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 CHST4Q8NCG5 386 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 MNTQ99583 582 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 SUSD2Q9UGT4 822 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 TMEM82A0PJX8 343 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 H3BMH7 237 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 NPIPB7O75200 414 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 DXOO77932 396 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 ACHEP22303 614 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 EPHA4P54764 986 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 STPG2Q8N412 459 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 BOLLQ8N9W6 283 aaKnown RBP12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 OR1N1Q8NGS0 311 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 ASB17Q8WXJ9 295 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 FGGYQ96C11 551 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC41A2Q96JW4 573 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 MMACHCQ9Y4U1 282 aa12.14□□□□□ -0.47
HERPUD1-204ENST00000439977 RLN2P04090 185 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 GABRA1P14867 456 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 C4BPBP20851 252 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 GALNSP34059 522 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 PMPCAQ10713 525 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 FAM166AQ6J272 317 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 RNF144BQ7Z419 303 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF248Q8NDW4 579 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 REG4Q9BYZ8 158 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 OR52A1Q9UKL2 312 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 HRH3Q9Y5N1 445 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 MS4A18H0YCH9 400 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 CYB5AP00167 134 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 MT-ATP6P00846 226 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 IGLV3-19P01714 112 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 ATF4P18848 351 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 M6PRP20645 277 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 PRKACBP22694 351 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 ARHGDIBP52566 201 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 DHODHQ02127 395 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 ROM1Q03395 351 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 IKZF1Q13422 519 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 MS4A18Q3C1V0 323 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 C14orf28Q4W4Y0 310 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 BPIFB2Q8N4F0 458 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 MARVELD3Q96A59 401 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 C5orf34Q96MH7 638 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC6A7Q99884 636 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms