RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CDKN1AP38936 164 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 ESRRGP62508 458 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 SCRN3Q0VDG4 424 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 PTGES3Q15185 160 aaKnown RBP16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 C11orf71Q6IPW1 123 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 CORO6Q6QEF8 472 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 LYPD4Q6UWN0 246 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 PTP4A1Q93096 173 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 POM121L2Q96KW2 1035 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 CIB1Q99828 191 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 OR51B6Q9H340 312 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 CXorf56Q9H5V9 222 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 TVP23BQ9NYZ1 205 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 SPEF1Q9Y4P9 236 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 LHFPL6Q9Y693 200 aa16.81■□□□□ 0.28
SEMA3B-206ENST00000439487 C5orf49A4QMS7 147 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 OVOL3O00110 214 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 SGCEO43556 437 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 GPRIN2O60269 458 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 DOK2O60496 412 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 OR4A8P0C604 315 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 FAM157BP0CG42 384 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 IGFBP5P24593 272 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 EPHA2P29317 976 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 GDI2P50395 445 aaKnown RBP16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 PPP2R2BQ00005 443 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 ADIPOQQ15848 244 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 CCDC92Q53HC0 331 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 VASH1Q7L8A9 365 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 LINC00346Q8IVM7 164 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 PERPQ96FX8 193 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 PLEKHA8Q96JA3 519 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 OSBPL10Q9BXB5 764 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 ZNF442Q9H7R0 627 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 PLEK2Q9NYT0 353 aa16.8■□□□□ 0.28
SEMA3B-206ENST00000439487 PRR23D1E9PI22 279 aaPredicted RBP16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 RER1O15258 196 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 TMCC2O75069 709 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 SNAP29O95721 258 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 BAG2O95816 211 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 PRR23D2P0DMB1 279 aaPredicted RBP16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 ZNF823P16415 610 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 GLRXP35754 106 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 SERPINF1P36955 418 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 PTH2RP49190 550 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 TESK1Q15569 626 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 MSMPQ1L6U9 139 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 MST1LQ2TV78 715 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 PLBD1Q6P4A8 553 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 ZNF511Q8NB15 262 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 STMN2Q93045 179 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 RBM4BQ9BQ04 359 aaKnown RBP16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 CDADC1Q9BWV3 514 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 TEX12Q9BXU0 123 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 GRIP2Q9C0E4 1043 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 OR51V1Q9H2C8 321 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 CXXC4Q9H2H0 198 aa16.79■□□□□ 0.28
SEMA3B-206ENST00000439487 VPS13CQ709C8 3753 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 ERICH4A6NGS2 130 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 VSTM5A8MXK1 200 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 COX5BP10606 129 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 PAICSP22234 425 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 FMO3P31513 532 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 GGT2P36268 569 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 POLR2IP36954 125 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 RPS27P42677 84 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 HTR5AP47898 357 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 HIST1H3AP68431 136 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 SNAPC1Q16533 368 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 SWI5Q1ZZU3 235 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 HIST2H3PS2Q5TEC6 136 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 LINC01590Q5TEZ4 76 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 HIST2H3AQ71DI3 136 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 CPOQ8IVL8 374 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 PQLC1Q8N2U9 271 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 GJC3Q8NFK1 279 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 OR6K6Q8NGW6 343 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 SLC7A6Q92536 515 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 CACNG6Q9BXT2 260 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 GSX2Q9BZM3 304 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 WDR76Q9H967 626 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 HINT3Q9NQE9 182 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 ZNF701Q9NV72 531 aaPredicted RBP16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 CMAHPQ9Y471 501 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 MED13LQ71F56 2210 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 CELSR1Q9NYQ6 3014 aa16.78■□□□□ 0.28
SEMA3B-206ENST00000439487 ZAR1LA6NP61 321 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 EI24O14681 340 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 SYNGR3O43761 229 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 PSKH1P11801 424 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 PAX1P15863 534 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 PCSK6P29122 969 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 WNT5AP41221 380 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 UCP2P55851 309 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 ADAM8P78325 824 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 RAB35Q15286 201 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 SLX4IPQ5VYV7 408 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 SLC18B1Q6NT16 456 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 TMEM154Q6P9G4 183 aa16.77■□□□□ 0.28
SEMA3B-206ENST00000439487 LRRC75A-AS1Q8N1F1 130 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms