RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 HTR5AP47898 357 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 TEKQ02763 1124 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.97
MCF2L-216ENST00000439475 PPP1R8Q12972 351 aaKnown RBP8.99□□□□□ -0.97
MCF2L-216ENST00000439475 BNIP1Q12981 228 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 KCNMB1Q16558 191 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 CLEC12AQ5QGZ9 265 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 SLC35F1Q5T1Q4 408 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 TMEM154Q6P9G4 183 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 UGT2A3Q6UWM9 527 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 LRP11Q86VZ4 500 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 ADGRG5Q8IZF4 528 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF786Q8N393 782 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 PAQR4Q8N4S7 273 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-216ENST00000439475 OR10G2Q8NGC3 310 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 OR5L1Q8NGL2 311 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 OR2AJ1Q8NGZ0 328 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 OR2T4Q8NH00 348 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 IPCEF1Q8WWN9 437 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-216ENST00000439475 FOXN4Q96NZ1 517 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 DCLRE1CQ96SD1 692 aaKnown RBP8.99□□□□□ -0.97
MCF2L-216ENST00000439475 TSSK6Q9BXA6 273 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 TPK1Q9H3S4 243 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 EGLN3Q9H6Z9 239 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF556Q9HAH1 456 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 RPRD1BQ9NQG5 326 aaKnown RBP8.99□□□□□ -0.97
MCF2L-216ENST00000439475 CYSLTR2Q9NS75 346 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 TBC1D23Q9NUY8 699 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 TBCCD1Q9NVR7 557 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 KLHL21Q9UJP4 597 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 POMPQ9Y244 141 aa8.99□□□□□ -0.97
MCF2L-216ENST00000439475 ITPR3Q14573 2671 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 HRNRQ86YZ3 2850 aaPredicted RBP8.98□□□□□ -0.97
MCF2L-216ENST00000439475 IGLV3-9A0A075B6K5 115 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 LOC100509620A0A075B734 347 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 PLSCR5A0PG75 271 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 OR6C6A6NF89 314 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 C17orf100A8MU93 164 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 H3BSA7 217 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 LY6HO94772 140 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 CLPTM1O96005 669 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 IGHV3-13P01766 116 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 SCG5P05408 212 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 ALDH3B1P43353 468 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 NR4A2P43354 598 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 RGS6P49758 472 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 GZMKP49863 264 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 PPP1CBP62140 327 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 MSMPQ1L6U9 139 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 PCGF3Q3KNV8 242 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 FAM209AQ5JX71 171 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF770Q6IQ21 691 aaPredicted RBP8.98□□□□□ -0.97
MCF2L-216ENST00000439475 ZBTB46Q86UZ6 589 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 OR6V1Q8N148 313 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 ZCCHC24Q8N2G6 241 aaKnown RBP8.98□□□□□ -0.97
MCF2L-216ENST00000439475 MAPK1IP1LQ8NDC0 245 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 NPEPL1Q8NDH3 523 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 SDR9C7Q8NEX9 313 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 OR2T33Q8NG76 320 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 ABHD4Q8TB40 342 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 SLC25A40Q8TBP6 338 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 TEX47Q8TBZ9 253 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 RDH5Q92781 318 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 TSSK2Q96PF2 358 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 TEX12Q9BXU0 123 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 HINT3Q9NQE9 182 aaKnown RBP8.98□□□□□ -0.97
MCF2L-216ENST00000439475 NKIRAS2Q9NYR9 191 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 ASH2LQ9UBL3 628 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 CGGBP1Q9UFW8 167 aaPredicted RBP8.98□□□□□ -0.97
MCF2L-216ENST00000439475 ATPIF1Q9UII2 106 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 GRIP1Q9Y3R0 1128 aa8.98□□□□□ -0.97
MCF2L-216ENST00000439475 OTOGQ6ZRI0 2925 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 IGLV1-36A0A0B4J1U3 117 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 OR6C68A6NDL8 312 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 ARRDC5A6NEK1 342 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 H3BN98 237 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 J3QW42 95 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 BHLHE40O14503 412 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 TPD52L2O43399 206 aaKnown RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 CD5LO43866 347 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 ICMTO60725 284 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 MPZL1O95297 269 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 NAT2P11245 290 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 ANXA8P13928 327 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 BLVRAP53004 296 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 TMEM33P57088 247 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 ERVS71-1P61550 626 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 CBX1P83916 185 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 GGTLC2Q14390 218 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 MAD2L1BPQ15013 274 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 TMEM249Q2WGJ8 235 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 ZMAT1Q5H9K5 638 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 ELFN2Q5R3F8 820 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 MBNL2Q5VZF2 373 aaKnown RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 CYB5R2Q6BCY4 276 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 CD300LDQ6UXZ3 194 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 VASH1Q7L8A9 365 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 LNX2Q8N448 690 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 OR1F12Q8NHA8 337 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms