RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TCEAL2Q9H3H9 227 aaPredicted RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 NIT2Q9NQR4 276 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 TMEM100Q9NV29 134 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 UQCC1Q9NVA1 299 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 DHCR7Q9UBM7 475 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 ZNF346Q9UL40 294 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 C19orf53Q9UNZ5 99 aaPredicted RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 PLEKHA6Q9Y2H5 1048 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 CABIN1Q9Y6J0 2220 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 CNTRLQ7Z7A1 2325 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 CDC40O60508 579 aaKnown RBP eCLIP7.72□□□□□ -1.17
HPS4-206ENST00000439453 EIF1BO60739 113 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 HLA-AP01891 365 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 ZNF883P0CG24 379 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ATXN8OSP0DMR3 200 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 AKT2P31751 481 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 EIF1P41567 113 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 PRKXP51817 358 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 C2orf76Q3KRA6 126 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 GXYLT1Q4G148 440 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ARHGAP40Q5TG30 622 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 DPY19L2P2Q6ZN68 376 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 NDUFAF7Q7L592 441 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ZNF595Q8IYB9 648 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ZNF614Q8N883 585 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 SLC22A8Q8TCC7 542 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 SAP25Q8TEE9 199 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 TMEM106AQ96A25 262 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 TEX101Q9BY14 249 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ATG5Q9H1Y0 275 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 MMP26Q9NRE1 261 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 OR1A2Q9Y585 309 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ADAMTS20P59510 1910 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 NUP210LQ5VU65 1888 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 COLCA2A8K830 154 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 OR2T1O43869 369 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 SSX5O60225 188 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 LDB3O75112 727 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 PCCBP05166 539 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 LIPCP11150 499 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 FOLR2P14207 255 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 CBR1P16152 277 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ID2Q02363 134 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 OR7A5Q15622 319 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 HYAL4Q2M3T9 481 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ADAMTSL4Q6UY14 1074 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 TMPRSS9Q7Z410 1059 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ZAR1Q86SH2 424 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 MISPQ8IVT2 679 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 SAMD14Q8IZD0 417 aaPredicted RBP7.71□□□□□ -1.17
HPS4-206ENST00000439453 ZSCAN1Q8NBB4 408 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 OR2L3Q8NG85 312 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 STOML3Q8TAV4 291 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 FAM3DQ96BQ1 224 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 SEH1LQ96EE3 360 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 PIK3IP1Q96FE7 263 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 TMEM9BQ9NQ34 198 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 LY6G6EA0A0G2JKS1 128 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 OR4C45A6NMZ5 311 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ALOX12BO75342 701 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ZNF432O94892 652 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 FBXO45P0C2W1 286 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ZNF735P0CB33 412 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ZNF888P0CJ79 500 aaPredicted RBP7.71□□□□□ -1.17
HPS4-206ENST00000439453 TPT1P13693 172 aaKnown RBP7.71□□□□□ -1.17
HPS4-206ENST00000439453 SNRPNP63162 240 aaKnown RBP7.71□□□□□ -1.17
HPS4-206ENST00000439453 SMCO1Q147U7 214 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 EXOSC6Q5RKV6 272 aaKnown RBP7.71□□□□□ -1.17
HPS4-206ENST00000439453 FHL5Q5TD97 284 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 SLC16A9Q7RTY1 509 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ZNF676Q8N7Q3 588 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 OR51A4Q8NGJ6 313 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 RNF141Q8WVD5 230 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ELF4Q99607 663 aaPredicted RBP7.71□□□□□ -1.17
HPS4-206ENST00000439453 BCL2L14Q9BZR8 327 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 TRIM2Q9C040 744 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 ACKR4Q9NPB9 350 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 DUSP22Q9NRW4 184 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 U3KQA8 63 aa7.71□□□□□ -1.17
HPS4-206ENST00000439453 LOC100289279A0A1B0GTE1 492 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 CPED1A4D0V7 1026 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 C5orf52A6NGY3 159 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 ZNF705EA8MWA4 302 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 F8VVB4 439 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 F8VWA3 439 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 KCNAB3O43448 404 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 BRINP1O60477 761 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 ICOSLGO75144 302 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 FARS2O95363 451 aaKnown RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 ABHD16AO95870 558 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 CELA2BP08218 269 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 ITGA5P08648 1049 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 HOXC4P09017 264 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 CPMP14384 443 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 EPHA8P29322 1005 aaPredicted RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 ACAA2P42765 397 aaKnown RBP7.71□□□□□ -1.18
HPS4-206ENST00000439453 EMDP50402 254 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 CXADRP78310 365 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 CDK3Q00526 305 aa7.71□□□□□ -1.18
HPS4-206ENST00000439453 RAB11BQ15907 218 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms