RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 TMEM239Q8WW34 195 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 RASSF5Q8WWW0 418 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 HDAC2Q92769 488 aaKnown RBP8.29□□□□□ -1.08
CCDC66-207ENST00000439445 NMD3Q96D46 503 aaKnown RBP8.29□□□□□ -1.08
CCDC66-207ENST00000439445 C4orf45Q96LM5 186 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 MRI1Q9BV20 369 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CCDC66-207ENST00000439445 WNT5BQ9H1J7 359 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 TXNIPQ9H3M7 391 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 C20orf141Q9NUB4 165 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 TMEM106BQ9NUM4 274 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 PLEK2Q9NYT0 353 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 RIMS3Q9UJD0 308 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 TIMM10BQ9Y5J6 103 aa8.29□□□□□ -1.08
CCDC66-207ENST00000439445 A0A1W2PPL8 197 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 GMNCA6NCL1 334 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 H3BSA7 217 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 SHOX2O60902 331 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 IGHV2-70P01814 119 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 IGHMP01871 453 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 CD55P08174 381 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 CST2P09228 141 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 ZNF12P17014 697 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 TNFRSF1AP19438 455 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 TNFSF4P23510 183 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 SLC6A9P48067 706 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 PCBD1P61457 104 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 SEC61A1P61619 476 aaKnown RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 DEFA6Q01524 100 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 PSG7Q13046 419 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 TOP3AQ13472 1001 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 PIN1Q13526 163 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 VMACQ2NL98 169 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 ALG10Q5BKT4 473 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 MTX3Q5HYI7 312 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 KLF17Q5JT82 389 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 ZNF774Q6NX45 483 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 CCDC80Q76M96 950 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 LRRC28Q86X40 367 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 OR2Z1Q8NG97 314 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 LIPHQ8WWY8 451 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 SLC25A28Q96A46 364 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 ALG12Q9BV10 488 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 MS4A7Q9GZW8 240 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 UNKLQ9H9P5 680 aaKnown RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 ZMAT3Q9HA38 289 aaKnown RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 PATZ1Q9HBE1 687 aaKnown RBP8.28□□□□□ -1.08
CCDC66-207ENST00000439445 BAG5Q9UL15 447 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 MED31Q9Y3C7 131 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 INSIG2Q9Y5U4 225 aa8.28□□□□□ -1.08
CCDC66-207ENST00000439445 DOCK11Q5JSL3 2073 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 NPIPB13A6NJU9 1138 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 C12orf71A8MTZ7 269 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 NPIPB4C9JG80 1138 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 ICMTO60725 284 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 OR5F1O95221 314 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 ABHD16AO95870 558 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 IGF2P01344 180 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 TSPAN19P0C672 248 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 GSTM3P21266 225 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 NOS3P29474 1203 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 OR1E2P47887 323 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 CRYBA2P53672 197 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 RPL27P61353 136 aaKnown RBP8.27□□□□□ -1.09
CCDC66-207ENST00000439445 BTG1P62324 171 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 IL13RA1P78552 427 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 ZMYND11Q15326 602 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 TMEM155Q4W5P6 130 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 PDLIM3Q53GG5 364 aaPredicted RBP8.27□□□□□ -1.09
CCDC66-207ENST00000439445 ESCO2Q56NI9 601 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 ZNF283Q8N7M2 679 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 CLDN22Q8N7P3 220 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 OR52E2Q8NGJ4 325 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 FNDC8Q8TC99 324 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 DYDC1Q8WWB3 177 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 CMBLQ96DG6 245 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 THOC1Q96FV9 657 aaKnown RBP8.27□□□□□ -1.09
CCDC66-207ENST00000439445 SAMD8Q96LT4 415 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 C1orf147Q96MC9 270 aaPredicted RBP8.27□□□□□ -1.09
CCDC66-207ENST00000439445 ZNF48Q96MX3 618 aaPredicted RBP8.27□□□□□ -1.09
CCDC66-207ENST00000439445 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
CCDC66-207ENST00000439445 MAN2C1Q9NTJ4 1040 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 PPP1R3CQ9UQK1 317 aa8.27□□□□□ -1.09
CCDC66-207ENST00000439445 POLR3KQ9Y2Y1 108 aaPredicted RBP8.27□□□□□ -1.09
CCDC66-207ENST00000439445 IGHV3OR16-10A0A075B7F0 116 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 SURF4O15260 269 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 PIP5K1CO60331 668 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 GPANK1O95872 356 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 RNASE1P07998 156 aaKnown RBP8.26□□□□□ -1.09
CCDC66-207ENST00000439445 THRBP10828 461 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 MSR1P21757 451 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 CD80P33681 288 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 GZMMP51124 257 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 CTXN1P60606 82 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 CYLC2Q14093 348 aaPredicted RBP8.26□□□□□ -1.09
CCDC66-207ENST00000439445 ENDOGQ14249 297 aaKnown RBP8.26□□□□□ -1.09
CCDC66-207ENST00000439445 SLC9A3R2Q15599 337 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 AGBL2Q5U5Z8 902 aa8.26□□□□□ -1.09
CCDC66-207ENST00000439445 NANOGP8Q6NSW7 305 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms