RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 NPIPA7E9PJI5 369 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 H0Y9J4 135 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 BTN3A3O00478 584 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 ANGPT2O15123 496 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 RGS16O15492 202 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 SLC19A2O60779 497 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 DNAJB6O75190 326 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 PLEKHA8P1O95397 391 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGHV3-48P01763 117 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 OPN1MWP04001 364 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 NPIPA8P0DM63 369 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 OPN1MW2P0DN77 364 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 OPN1MW3P0DN78 364 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 THRAP10827 490 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 MCF2P10911 925 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 PCMT1P22061 227 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 MMP11P24347 488 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 GCAP28676 217 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 LAP3P28838 519 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 HTR1FP30939 366 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 DAP3P51398 398 aaKnown RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 APOC4P55056 127 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 IMMTQ16891 758 aaKnown RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 HNRNPA1L2Q32P51 320 aaKnown RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 FILIP1LQ4L180 1135 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 C2orf83Q53S99 150 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 TMEM215Q68D42 235 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 WDR74Q6RFH5 385 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 CASC1Q6TDU7 716 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 UNQ9370/PRO34162Q6UXP9 181 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 PAQR7Q86WK9 346 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 ITPRIPQ8IWB1 547 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 CCDC65Q8IXS2 484 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 SLC35F2Q8IXU6 374 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 STK40Q8N2I9 435 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 SYT14Q8NB59 555 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 ACBD4Q8NC06 268 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZNF540Q8NDQ6 660 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 IPMKQ8NFU5 416 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR4D5Q8NGN0 318 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 TRMT10AQ8TBZ6 339 aaKnown RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 CT55Q8WUE5 264 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 MAIP1Q8WWC4 291 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 C7orf34Q96L11 122 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 IFT74Q96LB3 600 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 POPDC2Q9HBU9 364 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 APMAPQ9HDC9 416 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 KCNJ16Q9NPI9 418 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 DYRK4Q9NR20 520 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 RPS6KB2Q9UBS0 482 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 PCSK1NQ9UHG2 260 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 PTBP2Q9UKA9 531 aaKnown RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 NAP1L2Q9ULW6 460 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 NPIPA1Q9UND3 350 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 RPH3ALQ9UNE2 315 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 ERVW-1Q9UQF0 538 aa2.23□□□□□ -2.05
HMGB3P12-201ENST00000438745 POLEQ07864 2286 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 MYH9P35579 1960 aaKnown RBP2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 A0A1W2PNV4 684 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 RBMY1BA6NDE4 496 aaKnown RBP2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 RBMY1EA6NEQ0 496 aaKnown RBP2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 USP27XA6NNY8 438 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 F8VP50 259 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 CXCL13O43927 109 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 HUS1O60921 280 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 MTX2O75431 263 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGLV1-47P01700 117 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 HPNP05981 417 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 RBMY1DP0C7P1 496 aaKnown RBP2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 CXCL8P10145 99 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 PNMTP11086 282 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 CCDC130P13994 396 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 MGMTP16455 207 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 ATP5C1P36542 298 aaKnown RBP2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 PPT1P50897 306 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 PLK1P53350 603 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 IL17AQ16552 155 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 NSUN5P1Q3KNT7 163 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 CFAP157Q5JU67 520 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 PAGE3Q5JUK9 113 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 VAX1Q5SQQ9 334 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 ATAD3BQ5T9A4 648 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 OTPQ5XKR4 325 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 TMEM225Q6GV28 225 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 IGFL3Q6UXB1 125 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 SYT10Q6XYQ8 523 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 IL34Q6ZMJ4 242 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 HORMAD1Q86X24 394 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZNF683Q8IZ20 524 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 SVOPLQ8N434 492 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 DCAF4L2Q8NA75 395 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 C7orf33Q8WU49 177 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR8D1Q8WZ84 308 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 OR1E3Q8WZA6 343 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 ST8SIA1Q92185 356 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 RPUSD4Q96CM3 377 aaKnown RBP2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 BMFQ96LC9 184 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 TGM7Q96PF1 710 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 TSG101Q99816 390 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 ARHGDIGQ99819 225 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms