RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 DUX4L5P0CJ88 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUX4L6P0CJ89 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUX4L7P0CJ90 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 LIMS3P0CW19 117 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 LIMS4P0CW20 117 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 PSG1P11464 419 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 BCKDHAP12694 445 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ICAM2P13598 275 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 UGT2B7P16662 529 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF17P17021 662 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 CHRNB2P17787 502 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 EDNRAP25101 427 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ATP5A1P25705 553 aaKnown RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 PSMA1P25786 263 aaKnown RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 LOXP28300 417 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 SSTR2P30874 369 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 GCKP35557 465 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 BTDP43251 543 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR3A2P47893 321 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 EMDP50402 254 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 STC1P52823 247 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 AP2S1P53680 142 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 AQP5P55064 265 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 AP1S1P61966 158 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 RPS18P62269 152 aaKnown RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TFAMQ00059 246 aaKnown RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 RIGQ13278 110 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 SKP2Q13309 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 PRPSAP1Q14558 356 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 NFATC4Q14934 902 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TWIST1Q15672 202 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF284Q2VY69 593 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TRIM16LQ309B1 348 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 EIPR1Q53HC9 387 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 SPIN4Q56A73 249 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM42Q69YG0 159 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 CYB5R2Q6BCY4 276 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUX4L9Q6RFH8 374 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF730Q6ZMV8 503 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 FRRS1Q6ZNA5 592 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 C9orf47Q6ZRZ4 202 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM179Q6ZVK1 233 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM144Q7Z5S9 345 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 PIM3Q86V86 326 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 PIGZQ86VD9 579 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 BBS7Q8IWZ6 715 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR6V1Q8N148 313 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 PRELID2Q8N945 189 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZSCAN4Q8NAM6 433 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR6K3Q8NGY3 331 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR5B3Q8NH48 314 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 SLC7A13Q8TCU3 470 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 GATAD1Q8WUU5 269 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 HPSE2Q8WWQ2 592 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TADA1Q96BN2 335 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 SMIM19Q96E16 107 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ADTRPQ96IZ2 230 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 POM121L2Q96KW2 1035 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OXGR1Q96P68 337 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 IL17FQ96PD4 163 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR2V2Q96R30 315 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 HBEGFQ99075 208 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 NKX3-1Q99801 234 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 WDR77Q9BQA1 342 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 CABLES2Q9BTV7 478 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TIPINQ9BVW5 301 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 NMUR2Q9GZQ4 415 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ALX4Q9H161 411 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 FNDC4Q9H6D8 234 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TMEM38AQ9H6F2 299 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 UBE2ZQ9H832 354 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 UGT1A7Q9HAW7 530 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 CTPS2Q9NRF8 586 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OLFML3Q9NRN5 406 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ARMC1Q9NVT9 282 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 IL17CQ9P0M4 197 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 GALPQ9UBC7 116 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 DUX4Q9UBX2 424 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 MUTYHQ9UIF7 546 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 KCNG2Q9UJ96 466 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF391Q9UJN7 358 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 MGAT4AQ9UM21 535 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 FARSAQ9Y285 508 aaKnown RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR51B4Q9Y5P0 310 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 HS3ST3B1Q9Y662 390 aa3.06□□□□□ -1.92
HMGB1P12-201ENST00000438594 TTC3P53804 2025 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PCF11O94913 1555 aaKnown RBP3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CNTNAP1P78357 1384 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 PCDH11XQ9BZA7 1347 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 A0A0A6YYD4 124 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TINCRA0A1B0GVN0 87 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 SMIM9A6NGZ8 99 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 ZNF98A6NK75 572 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 OR5B21A6NL26 309 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 HACD1B0YJ81 288 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 LINC00587B1AMM8 73 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 TRDCB7Z8K6 153 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 M0QZK8 103 aa3.05□□□□□ -1.92
HMGB1P12-201ENST00000438594 CDIPTO14735 213 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms