RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 C19orf84I3L1E1 186 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 SGCEO43556 437 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 SELENOFO60613 162 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 FADS2O95864 444 aaKnown RBP16.03■□□□□ 0.16
HDAC6-208ENST00000438518 SERPINA5P05154 406 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 THBDP07204 575 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 LYNP07948 512 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 CCDC159P0C7I6 412 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 PIPP12273 146 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-208ENST00000438518 CRYGSP22914 178 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 NUDT6P53370 316 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 PSG4Q00888 419 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 ECH1Q13011 328 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 RAB35Q15286 201 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 C6orf141Q5SZD1 244 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 KCTD18Q6PI47 426 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-208ENST00000438518 TMEM108Q6UXF1 575 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-208ENST00000438518 CDC20BQ86Y33 519 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 ASB17Q8WXJ9 295 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 HTRA1Q92743 480 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 ZNF75AQ96N20 296 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 INPP5EQ9NRR6 644 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 SCN3BQ9NY72 215 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 PLEK2Q9NYT0 353 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 AASSQ9UDR5 926 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 KCNN3Q9UGI6 736 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 LAMP5Q9UJQ1 280 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 BLOC1S6Q9UL45 172 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 LRRC42Q9Y546 428 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 FLNCQ14315 2725 aa16.03■□□□□ 0.16
HDAC6-208ENST00000438518 ZNF503-AS2A6NEH8 195 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 DOK2O60496 412 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 CLDN1O95832 211 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 MRPL3P09001 348 aaKnown RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 ZNF14P17017 642 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 PTAFRP25105 342 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 NAA10P41227 235 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 SLC15A1P46059 708 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 NR1H2P55055 460 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 PIGFQ07326 219 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 DBPQ10586 325 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 PABPC1L2AQ5JQF8 200 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 ELFN2Q5R3F8 820 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 SEZ6L2Q6UXD5 910 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 B3GLCTQ6Y288 498 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 MEX3BQ6ZN04 569 aaKnown RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 DCXRQ7Z4W1 244 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 EGFL6Q8IUX8 553 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 SLC35F2Q8IXU6 374 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 OR1J2Q8NGS2 313 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 FGFBP3Q8TAT2 258 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 LINC01560Q8TB33 94 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 ST7LQ8TDW4 575 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 MRPL48Q96GC5 212 aaKnown RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 COQ7Q99807 217 aa16.02■□□□□ 0.16
HDAC6-208ENST00000438518 ESRP2Q9H6T0 727 aaKnown RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 DDX28Q9NUL7 540 aaKnown RBP16.02■□□□□ 0.16
HDAC6-208ENST00000438518 A0A1W2PR80 420 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 EFCAB10A6NFE3 127 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF878C9JN71 531 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF670-ZNF695F2Z2N8 137 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 ALOX5APP20292 161 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 TUBA1BP68363 451 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 TUBA4AP68366 448 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 EIF2B1Q14232 305 aaKnown RBP16.01■□□□□ 0.15
HDAC6-208ENST00000438518 SMN1Q16637 294 aaKnown RBP16.01■□□□□ 0.15
HDAC6-208ENST00000438518 BEX5Q5H9J7 111 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 RBM48Q5RL73 367 aaKnown RBP16.01■□□□□ 0.15
HDAC6-208ENST00000438518 DEGS2Q6QHC5 323 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 TUBA1AQ71U36 451 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 WFDC8Q8IUA0 241 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 LINC00346Q8IVM7 164 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 ZC3HAV1LQ96H79 300 aaKnown RBP16.01■□□□□ 0.15
HDAC6-208ENST00000438518 ATF6BQ99941 703 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 ABHD6Q9BV23 337 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 JAM3Q9BX67 310 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 WNT5BQ9H1J7 359 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 NOX3Q9HBY0 568 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 FGF20Q9NP95 211 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-208ENST00000438518 CRIM1Q9NZV1 1036 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 TPRKBQ9Y3C4 175 aa16.01■□□□□ 0.15
HDAC6-208ENST00000438518 OR6C6A6NF89 314 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 J3QRE1 110 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 SLC1A7O00341 560 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 RER1O15258 196 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 SYNGR3O43761 229 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 FAM20BO75063 409 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 PATE4P0C8F1 98 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 DCKP27707 260 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 APLNRP35414 380 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 IDH3GP51553 393 aaPredicted RBP16■□□□□ 0.15
HDAC6-208ENST00000438518 EGR3Q06889 387 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 DAZAP2Q15038 168 aaPredicted RBP16■□□□□ 0.15
HDAC6-208ENST00000438518 TBC1D28Q2M2D7 210 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 CCDC92Q53HC0 331 aaPredicted RBP16■□□□□ 0.15
HDAC6-208ENST00000438518 LAIR2Q6ISS4 152 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 CORO6Q6QEF8 472 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 CFAP77Q6ZQR2 320 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 C22orf34Q6ZV56 151 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms