RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 STOMP27105 288 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 CDAP32320 146 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 GALNSP34059 522 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SFTPDP35247 375 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 ART1P52961 327 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 RPS18P62269 152 aaKnown RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 CBFBQ13951 182 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 MS4A18Q3C1V0 323 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 C2orf76Q3KRA6 126 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 LINC00303Q3SY05 128 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 DHRS13Q6UX07 377 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 RNF144BQ7Z419 303 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 LRRTM1Q86UE6 522 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 CDH24Q86UP0 819 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 NAXDQ8IW45 347 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 PLPP5Q8NEB5 264 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 OR10G3Q8NGC4 313 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SMIM4Q8WVI0 70 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 FCAMRQ8WWV6 532 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SCMH1Q96GD3 660 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.48□□□□□ -1.059e-7■■□□□ 14.3
CUX1-206ENST00000437600 TMEM9BQ9NQ34 198 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 KLRF1Q9NZS2 232 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SLC22A23A1A5C7 686 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 ATP6V1G2-DDX39BF2Z307 99 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 PLPP3O14495 311 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 GPRIN2O60269 458 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 ZNF250P15622 560 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 PNLIPP16233 465 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 PTBP1P26599 531 aaKnown RBP eCLIP8.48□□□□□ -1.054e-11■■■■■ 42.8
CUX1-206ENST00000437600 PITPNAQ00169 270 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 ZNF385CQ66K41 422 aaPredicted RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 B3GNTL1Q67FW5 361 aaPredicted RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 FAM198BQ6UWH4 519 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 CREB3L2Q70SY1 520 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 DCXRQ7Z4W1 244 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 OR8H3Q8N146 312 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 FAM46BQ96A09 425 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SOX7Q9BT81 388 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 C20orf85Q9H1P6 137 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 SEC61A2Q9H9S3 476 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 ZFP64Q9NPA5 681 aa8.48□□□□□ -1.05
CUX1-206ENST00000437600 EIF3KQ9UBQ5 218 aaKnown RBP8.48□□□□□ -1.05
CUX1-206ENST00000437600 PIEZO1Q92508 2521 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 CIB4A0PJX0 185 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 TMEM200CA6NKL6 621 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 A8MVM7 634 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 GPR171O14626 319 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 TOX3O15405 576 aaPredicted RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 RAMP1O60894 148 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 RLN1P04808 185 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 ALDOBP05062 364 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 POU3F4P49335 361 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 SLC25A1P53007 311 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 ZP1P60852 638 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 TNK1Q13470 666 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 CAMK2DQ13557 499 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 SLC17A1Q14916 467 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 GLYATL3Q5SZD4 288 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 KCTD20Q7Z5Y7 419 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 RTN4RL2Q86UN3 420 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 OR2T35Q8NGX2 323 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 OR56B4Q8NH76 319 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 GPR148Q8TDV2 347 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 LOXL4Q96JB6 756 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 DCBLD2Q96PD2 775 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 CHST6Q9GZX3 395 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 COMMD4Q9H0A8 199 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 NOX3Q9HBY0 568 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 CA10Q9NS85 328 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 MOKQ9UQ07 419 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 PTRH2Q9Y3E5 179 aaKnown RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 B3GALT1Q9Y5Z6 326 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 CACNA1GO43497 2377 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 AHSA1O95433 338 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 HRGP04196 525 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 LIPCP11150 499 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 POLR2HP52434 150 aaKnown RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 PNLIPRP2P54317 469 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 TAS2R20P59543 309 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 IL10RAQ13651 578 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 GFOD2Q3B7J2 385 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 PCGF3Q3KNV8 242 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 NHLRC1Q6VVB1 395 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 ZNF627Q7L945 461 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 CPEB2Q7Z5Q1 589 aaKnown RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 ZNF441Q8N8Z8 693 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 AGBL5Q8NDL9 886 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 DEFB124Q8NES8 71 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 NFAM1Q8NET5 270 aaPredicted RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 ADAMTS14Q8WXS8 1223 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 DPCDQ9BVM2 203 aaPredicted RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 SLITRK2Q9H156 845 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 NIPAL2Q9H841 368 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 EXOSC3Q9NQT5 275 aaKnown RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 B3GNT2Q9NY97 397 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 TAS2R4Q9NYW5 299 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 ZNF69Q9UC07 566 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 FBXL2Q9UKC9 423 aa8.47□□□□□ -1.05
CUX1-206ENST00000437600 LRP12Q9Y561 859 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms