RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SIGLEC14Q08ET2 396 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 AQP6Q13520 282 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TRAM2Q15035 370 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 PSG5Q15238 335 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 NSDHLQ15738 373 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF726P1Q15940 193 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 PSMD5Q16401 504 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 NRF1Q16656 503 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 HNRNPA1L2Q32P51 320 aaKnown RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 ZBED5Q49AG3 693 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 PIGGQ5H8A4 983 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 EOGTQ5NDL2 527 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 MLIPQ5VWP3 458 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 SLC25A25Q6KCM7 469 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 C20orf203Q8NBC4 194 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 FBXO36Q8NEA4 188 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 OR2AP1Q8NGE2 309 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 OR5T3Q8NGG3 340 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 OR51L1Q8NGJ5 315 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 OR51S1Q8NGJ8 323 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 OR51F2Q8NH61 342 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 OR5K2Q8NHB8 316 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 PHF10Q8WUB8 498 aaKnown RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 ACOT11Q8WXI4 607 aaPredicted RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TMEM158Q8WZ71 300 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 FGF14Q92915 247 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 ISOC2Q96AB3 205 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 SERPINB12Q96P63 405 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 HIST1H4GQ99525 98 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 SH3GL1Q99961 368 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 RASL11BQ9BPW5 248 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 HINT2Q9BX68 163 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 SELENOIQ9C0D9 397 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 VCXQ9H320 206 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TMEM38AQ9H6F2 299 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 MRPL47Q9HD33 250 aaKnown RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 PEF1Q9UBV8 284 aaKnown RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CFAP45Q9UL16 551 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TRAPPC4Q9Y296 219 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 STK38LQ9Y2H1 464 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 RCL1Q9Y2P8 373 aaKnown RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 GOLT1BQ9Y3E0 138 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 F11RQ9Y624 299 aaKnown RBP1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CACNG2Q9Y698 323 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 CAMTA1Q9Y6Y1 1673 aa1.86□□□□□ -2.11
PTPN4-205ENST00000433888 TRBV6-6A0A0A6YYG2 114 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 TMEM120BA0PK00 339 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 CCDC182A6NF36 153 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 NCBP2LA6PVI3 153 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 A8MUA0 341 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 KMOO15229 486 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ICOSLGO75144 302 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 NPIPB7O75200 414 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ENTPD5O75356 428 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 SNAPINO95295 136 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 TDP2O95551 362 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ARG1P05089 322 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 TCP1P17987 556 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 GABRG2P18507 467 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 U2AF2P26368 475 aaKnown RBP eCLIP1.85□□□□□ -2.111e-6■■■□□ 15.1
PTPN4-205ENST00000433888 LCN1P31025 176 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 SERPINB5P36952 375 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 KIR2DS4P43632 304 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 CSNK1A1P48729 337 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 MRPL19P49406 292 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 SSR4P51571 173 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 CCR8P51685 355 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 RPS21P63220 83 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 RAD51Q06609 339 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF33AQ06730 810 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 SLAQ13239 276 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 SF3A2Q15428 464 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 GUCA2BQ16661 112 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 HSDL1Q3SXM5 330 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 VAX1Q5SQQ9 334 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 C11orf71Q6IPW1 123 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ADNP2Q6IQ32 1131 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ASCL4Q6XD76 172 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ACP7Q6ZNF0 438 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 RNF165Q6ZSG1 346 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 MRPL21Q7Z2W9 205 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 MYOCDQ8IZQ8 938 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 TCAIMQ8N3R3 496 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 JAGN1Q8N5M9 183 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 INO80EQ8NBZ0 244 aaPredicted RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 OR4D6Q8NGJ1 314 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 OR10R2Q8NGX6 335 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 OR51E1Q8TCB6 317 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 C7orf33Q8WU49 177 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 GEMIN6Q8WXD5 167 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 RAB1CQ92928 201 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 LRRC58Q96CX6 371 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ECSITQ9BQ95 431 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 BEX2Q9BXY8 128 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 CHRNA10Q9GZZ6 450 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 GAL3ST2Q9H3Q3 398 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 XKR8Q9H6D3 395 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 UBE2ZQ9H832 354 aaPredicted RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 PLGRKTQ9HBL7 147 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 TMEM165Q9HC07 324 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms