RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TECPR2O15040 1411 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 FAM135BQ49AJ0 1406 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 RIMS2Q9UQ26 1411 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 KNDC1Q76NI1 1749 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 ADGRB1O14514 1584 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 A0A0G2JLM5 398 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 KBTBD11-OT1A0A1B0GTJ5 212 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 ERICH4A6NGS2 130 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 KRTAP4-16G5E9R7 235 aaPredicted RBP4.12□□□□□ -1.75
USP54-206ENST00000433394 GOLGA8TH3BQL2 631 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 KMOO15229 486 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 EIF3HO15372 352 aaKnown RBP eCLIP4.12□□□□□ -1.75
USP54-206ENST00000433394 CCNB2O95067 398 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 BGLAPP02818 100 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 RETP07949 1114 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 ZNF250P15622 560 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 BCKDHBP21953 392 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 CTRLP40313 264 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 CDKN1BP46527 198 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 NMUP48645 174 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 NOVP48745 357 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 PGGHGQ32M88 737 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 SOHLH1Q5JUK2 328 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 LY6G6FQ5SQ64 297 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 VAX1Q5SQQ9 334 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 ANKRD22Q5VYY1 191 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 CLEC2AQ6UVW9 174 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 LYPD6BQ8NI32 183 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 LKAAEAR1Q8TD35 194 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 CAPSLQ8WWF8 208 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 OR5B12Q96R08 314 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 PTTG3PQ9NZH4 202 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 CLN8Q9UBY8 286 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 TRAPPC4Q9Y296 219 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 TTC41PQ6P2S7 1318 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 MAPK8IP3Q9UPT6 1336 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 ABCC11Q96J66 1382 aa4.12□□□□□ -1.75
USP54-206ENST00000433394 MED14O60244 1454 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 PTPRMP28827 1452 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 ALKQ9UM73 1620 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 IGKV1D-13A0A0B4J2D9 117 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 A8MU10 97 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 HIDE1A8MVS5 230 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 CHST1O43916 411 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 C6orf47O95873 294 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 MOSP00540 346 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 POLR2MP0CAP2 368 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 IGKV1-13P0DP09 117 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 NR2C1P13056 603 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 ADRB3P13945 408 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 GSTM3P21266 225 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 WARSP23381 471 aaKnown RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 DCKP27707 260 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 DRD3P35462 400 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 CYB561P49447 251 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 RGS19P49795 217 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 FGF8P55075 233 aaPredicted RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 HMGCS1Q01581 520 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 PAX5Q02548 391 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 SELENBP1Q13228 472 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 TTLL9Q3SXZ7 439 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 TTC19Q6DKK2 380 aaPredicted RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 SPESP1Q6UW49 350 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 Q6ZSR3 168 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 ZNF621Q6ZSS3 439 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 ZNF429Q86V71 674 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 HSD17B11Q8NBQ5 300 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 OR2A1Q8NGT9 310 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 ACTRT1Q8TDG2 376 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 CD300LFQ8TDQ1 290 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 ASB9Q96DX5 294 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 PRRC1Q96M27 445 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 JSRP1Q96MG2 331 aaPredicted RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 FAM210AQ96ND0 272 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 HDHD3Q9BSH5 251 aaPredicted RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 PARP12Q9H0J9 701 aaKnown RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 LINC00597Q9H2U6 94 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 ELOVL6Q9H5J4 265 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 SLCO1B3Q9NPD5 702 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 STOX2Q9P2F5 926 aaPredicted RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 SETD1AO15047 1707 aaKnown RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 NFASCO94856 1347 aa4.11□□□□□ -1.75
USP54-206ENST00000433394 LRPPRCP42704 1394 aaKnown RBP4.11□□□□□ -1.75
USP54-206ENST00000433394 ZNF318Q5VUA4 2279 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 ARHGEF28Q8N1W1 1705 aaKnown RBP4.1□□□□□ -1.75
USP54-206ENST00000433394 IGKV6D-41A0A0C4DH26 115 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 L7N2F9 121 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 M0R3G1 203 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 CDC40O60508 579 aaKnown RBP eCLIP4.1□□□□□ -1.75
USP54-206ENST00000433394 FKBP6O75344 327 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 AQP2P41181 271 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 UBE2AP49459 152 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 VSX2P58304 361 aaPredicted RBP4.1□□□□□ -1.75
USP54-206ENST00000433394 IFT88Q13099 833 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 TRAM2Q15035 370 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 GUCA2BQ16661 112 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 HSDL1Q3SXM5 330 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 C2orf83Q53S99 150 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 PIGGQ5H8A4 983 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 PLCXD3Q63HM9 321 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms