RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 COILP38432 576 aaPredicted RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 MAP3K8P41279 467 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 MAGEA2P43356 314 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 HTR5AP47898 357 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 NPBWR2P48146 333 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 TGM4P49221 684 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 PLP1P60201 277 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 RAB4BP61018 213 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 UBE2KP61086 200 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 PSME3P61289 254 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ERVS71-1P61550 626 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ADARB1P78563 741 aaKnown RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 TLE4Q04727 773 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 CHRNB3Q05901 458 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 TFDP1Q14186 410 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 NDUFA5Q16718 116 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 TMEM249Q2WGJ8 235 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ACSF3Q4G176 576 aaPredicted RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 SFT2D3Q587I9 215 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 LY6G6FQ5SQ64 297 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 SLX4IPQ5VYV7 408 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 REEP3Q6NUK4 255 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 IL34Q6ZMJ4 242 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 PGAP1Q75T13 922 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 P4HA3Q7Z4N8 544 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 GOLGA7Q7Z5G4 137 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 MMAAQ8IVH4 418 aaKnown RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 GID4Q8IVV7 300 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 HS3ST5Q8IZT8 346 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 LINC01561Q8N1V8 128 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ZNF433Q8N7K0 673 aaPredicted RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 DCAF4L2Q8NA75 395 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 MFSD9Q8NBP5 474 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 CCDC112Q8NEF3 446 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 OR4D5Q8NGN0 318 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 OR1F12Q8NHA8 337 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 WDR36Q8NI36 951 aaKnown RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 BLOC1S5Q8TDH9 187 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 SRSF12Q8WXF0 261 aaKnown RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 NTAN1Q96AB6 310 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 C10orf35Q96D05 121 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 RMND5BQ96G75 393 aaPredicted RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 ZNF578Q96N58 590 aaPredicted RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 SLC38A2Q96QD8 506 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 FMO2Q99518 471 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ZNF251Q9BRH9 671 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 MAP1LC3CQ9BXW4 147 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 SLC22A4Q9H015 551 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 RACGAP1Q9H0H5 632 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 GBA3Q9H227 469 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 GLIPR2Q9H4G4 154 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ABCB9Q9NP78 766 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 PARVAQ9NVD7 372 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 GID8Q9NWU2 228 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 MARCH5Q9NX47 278 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 CMTM6Q9NX76 183 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ZNF490Q9ULM2 529 aaPredicted RBP2.08□□□□□ -2.08
CLK1-204ENST00000432425 L3MBTL1Q9Y468 752 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 HYOU1Q9Y4L1 999 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 PPIAL4AQ9Y536 164 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 TIMM10BQ9Y5J6 103 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ZFYVE9O95405 1425 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 ANKRD30BQ9BXX2 1392 aa2.08□□□□□ -2.08
CLK1-204ENST00000432425 TRBV11-1A0A0K0K1C0 115 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 C2orf74A8MZ97 194 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CLDN5O00501 218 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CLOCKO15516 846 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 XRCC2O43543 280 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 RCBTB2O95199 551 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 DEXIO95424 95 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 GSTT2P0CG29 244 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 GSTT2BP0CG30 244 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 SLC35E2BP0CK96 405 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 RNH1P13489 461 aaKnown RBP2.07□□□□□ -2.08
CLK1-204ENST00000432425 HLA-GP17693 338 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 PGAM1P18669 254 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 XRCC1P18887 633 aaPredicted RBP2.07□□□□□ -2.08
CLK1-204ENST00000432425 PMCHP20382 165 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 M6PRP20645 277 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 DCKP27707 260 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 OTX1P32242 354 aaPredicted RBP2.07□□□□□ -2.08
CLK1-204ENST00000432425 IFNA8P32881 189 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 DUSP3P51452 185 aaPredicted RBP2.07□□□□□ -2.08
CLK1-204ENST00000432425 PLA2G16P53816 162 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 SRYQ05066 204 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 EBI3Q14213 229 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 GPNMBQ14956 572 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 TSC22D1Q15714 1073 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CYB5R2Q6BCY4 276 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 H3F3CQ6NXT2 135 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 PRMT9Q6P2P2 845 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CXCL17Q6UXB2 119 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 ZNF562Q6V9R5 426 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 HACD2Q6Y1H2 254 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 ZNF621Q6ZSS3 439 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CENPUQ71F23 418 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 NIPA1Q7RTP0 329 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 SMIM15Q7Z3B0 74 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 FAM71AQ8IYT1 594 aa2.07□□□□□ -2.08
CLK1-204ENST00000432425 CDRT4Q8N9R6 151 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms