RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 B3GLCTQ6Y288 498 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 MEX3BQ6ZN04 569 aaKnown RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 DPY19L4Q7Z388 723 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 LINC00346Q8IVM7 164 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 DMRTC2Q8IXT2 367 aaPredicted RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 SLC35F2Q8IXU6 374 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 OTOSQ8NHW6 89 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 FAM222BQ8WU58 562 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 FBXO17Q96EF6 278 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 WFIKKN1Q96NZ8 548 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 OR2H1Q9GZK4 316 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 B3GNT2Q9NY97 397 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 CRNNQ9UBG3 495 aaPredicted RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 AASSQ9UDR5 926 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 LAMP5Q9UJQ1 280 aa9.6□□□□□ -0.87
CHD4-202ENST00000430771 GDF2Q9UK05 429 aaPredicted RBP9.6□□□□□ -0.87
CHD4-202ENST00000430771 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 USP9XQ93008 2570 aaPredicted RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 A1L4Q6 167 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ZNF503-AS2A6NEH8 195 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 EFCAB10A6NFE3 127 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ZNF878C9JN71 531 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ZNF670-ZNF695F2Z2N8 137 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 M0R1B8 84 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 SLC1A7O00341 560 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 FADS2O95864 444 aaKnown RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 COX5BP10606 129 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 PIPP12273 146 aaPredicted RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 CRYGSP22914 178 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 APLNRP35414 380 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 HTR5AP47898 357 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 PIGFQ07326 219 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 TBC1D28Q2M2D7 210 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 KLHL22Q53GT1 634 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 BEX5Q5H9J7 111 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 PABPC1L2AQ5JQF8 200 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ELFN2Q5R3F8 820 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 OTPQ5XKR4 325 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ALKBH2Q6NS38 261 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 TMEM108Q6UXF1 575 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 DCXRQ7Z4W1 244 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 CDC20BQ86Y33 519 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 OR10H4Q8NGA5 316 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 LINC01560Q8TB33 94 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ASB17Q8WXJ9 295 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 MRPL48Q96GC5 212 aaKnown RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 COQ7Q99807 217 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ATF6BQ99941 703 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 KCNS3Q9BQ31 491 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 ESRP2Q9H6T0 727 aaKnown RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 NOX3Q9HBY0 568 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 INPP5EQ9NRR6 644 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 SCN3BQ9NY72 215 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 CNOT2Q9NZN8 540 aaKnown RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 CRIM1Q9NZV1 1036 aa9.59□□□□□ -0.87
CHD4-202ENST00000430771 SPTBN1Q01082 2364 aaKnown RBP9.59□□□□□ -0.87
CHD4-202ENST00000430771 OR6C6A6NF89 314 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 RER1O15258 196 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 CLDN1O95832 211 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 IGLV1-44P01699 117 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 SERPINA5P05154 406 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 THBDP07204 575 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 CCDC159P0C7I6 412 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 OR2T7P0C7T2 308 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 PATE4P0C8F1 98 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 EPXP11678 715 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 COX6B1P14854 86 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 PTAFRP25105 342 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 RPS27P42677 84 aaKnown RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 SLC15A1P46059 708 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 ZNF83P51522 516 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 NR1H2P55055 460 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 GRB2P62993 217 aaKnown RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 HIST1H3AP68431 136 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 PSG4Q00888 419 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 ECH1Q13011 328 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 SNTB1Q13884 538 aaKnown RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 SMN1Q16637 294 aaKnown RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 C6orf141Q5SZD1 244 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 HIST2H3PS2Q5TEC6 136 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 ZNF774Q6NX45 483 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 KCTD18Q6PI47 426 aaPredicted RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 CORO6Q6QEF8 472 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 SEZ6L2Q6UXD5 910 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 CFAP77Q6ZQR2 320 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 HIST2H3AQ71DI3 136 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 VASH1Q7L8A9 365 aaPredicted RBP9.58□□□□□ -0.88
CHD4-202ENST00000430771 FAM220AQ7Z4H9 259 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 ACBD4Q8NC06 268 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 SLC30A7Q8NEW0 376 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 IL17RDQ8NFM7 739 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 BPIFB6Q8NFQ5 453 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 OR4F15Q8NGB8 312 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 OR1J2Q8NGS2 313 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 OR2T27Q8NH04 317 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 AKR7LQ8NHP1 331 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 FGFBP3Q8TAT2 258 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 ST7LQ8TDW4 575 aa9.58□□□□□ -0.88
CHD4-202ENST00000430771 IPCEF1Q8WWN9 437 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms