RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KLHDC7BQ96G42 594 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 MOGAT1Q96PD6 335 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 SMAD5Q99717 465 aaKnown RBP7.84□□□□□ -1.16
GABPB1-205ENST00000429662 RAB33BQ9H082 229 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 TXNIPQ9H3M7 391 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 C1orf198Q9H425 327 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 PRORYQ9H606 182 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 ELOVL3Q9HB03 270 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 APMAPQ9HDC9 416 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 PDE7BQ9NP56 450 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 FSCN3Q9NQT6 498 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 OPN4Q9UHM6 478 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 B9D1Q9UPM9 204 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 DHDHQ9UQ10 334 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 KLHDC2Q9Y2U9 406 aa7.84□□□□□ -1.16
GABPB1-205ENST00000429662 USP9YO00507 2555 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TRAV8-7A0A075B6U6 113 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TRAV18A0A075B6X5 111 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 A0A0D9SG52 128 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 CIB4A0PJX0 185 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PRSS37A4D1T9 235 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 MFSD2BA6NFX1 497 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TLCD2A6NGC4 264 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TVP23AA6NH52 213 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 A6NIZ1 184 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TMEM200CA6NKL6 621 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 RFPL4AA6NLU0 287 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 OR6C76A6NM76 312 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 ALG1L2C9J202 215 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 RFPL4AL1F8VTS6 287 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 H3BUI4 141 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 J3QKU1 62 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PSMD9O00233 223 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 SUSD5O60279 629 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TOXO94900 526 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 AKR7A3O95154 331 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 WNT11O96014 354 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 CFDP00746 253 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 ITGB2P05107 769 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 F13BP05160 661 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 LPLP06858 475 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 GABRA1P14867 456 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 RAB6AP20340 208 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 MAOAP21397 527 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 CD1CP29017 333 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 IL12BP29460 328 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 POU3F4P49335 361 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 POLR2HP52434 150 aaKnown RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 MAP2K6P52564 334 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PNLIPRP2P54317 469 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 RAP1BP61224 184 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PPP1CAP62136 330 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 RAP1AP62834 184 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 MAT1AQ00266 395 aaKnown RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 GK2Q14410 553 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 HLXQ14774 488 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 ELAVL1Q15717 326 aaKnown RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 DEFB110Q30KQ9 67 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 C2orf76Q3KRA6 126 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 WDR38Q5JTN6 314 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 RAB12Q6IQ22 244 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 RGS7BPQ6MZT1 257 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 STEAP1BQ6NZ63 245 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TMEM65Q6PI78 240 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 DEGS2Q6QHC5 323 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 ZNF704Q6ZNC4 412 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 OVCH2Q7RTZ1 564 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 DPY19L4Q7Z388 723 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PRSS42Q7Z5A4 293 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 HSD17B13Q7Z5P4 300 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 MISPQ8IVT2 679 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PRSS35Q8N3Z0 413 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 FRMD1Q8N878 549 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 NKAIN3Q8N8D7 197 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 OR6M1Q8NGM8 313 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 OR6K3Q8NGY3 331 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PTPMT1Q8WUK0 201 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TNFAIP8L1Q8WVP5 186 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 PIGKQ92643 395 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 DAZLQ92904 295 aaKnown RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 TAAR8Q969N4 342 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 ARSGQ96EG1 525 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 KTI12Q96EK9 354 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-205ENST00000429662 SLC25A32Q9H2D1 315 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 SDHAF2Q9NX18 166 aa7.83□□□□□ -1.16
GABPB1-205ENST00000429662 SNRNP200O75643 2136 aaKnown RBP7.82□□□□□ -1.16
GABPB1-205ENST00000429662 ITPR2Q14571 2701 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 SCN3AQ9NY46 2000 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 A0A1W2PPC4 97 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 NPIPB13A6NJU9 1138 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 A8MVM7 634 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 B4DGG1 531 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 NPIPB4C9JG80 1138 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 CDC123O75794 336 aaPredicted RBP7.82□□□□□ -1.16
GABPB1-205ENST00000429662 IGKV3-11P04433 115 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 RLN1P04808 185 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 ISG15P05161 165 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 ACSM4P0C7M7 580 aa7.82□□□□□ -1.16
GABPB1-205ENST00000429662 UBBP0CG47 229 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms