RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SLX4IPQ5VYV7 408 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 ERI1Q8IV48 349 aaKnown RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 ZNF584Q8IVC4 421 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 BBS1Q8NFJ9 593 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 SMAP2Q8WU79 429 aaPredicted RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 FBXW5Q969U6 566 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 ZMYND19Q96E35 227 aaPredicted RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 NMNAT2Q9BZQ4 307 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 WDR76Q9H967 626 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 HINT3Q9NQE9 182 aaKnown RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 USE1Q9NZ43 259 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 ITPR2Q14571 2701 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 VSTM5A8MXK1 200 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 DOK2O60496 412 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 SNAP29O95721 258 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 GAAP10253 952 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 DNASE1P24855 282 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 KCNMB1Q16558 191 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 C3orf36Q3SXR2 165 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 SPATC1Q76KD6 591 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 SYT9Q86SS6 491 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 GJC3Q8NFK1 279 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 FAM81AQ8TBF8 368 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 CCL19Q99731 98 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 GABARAPL3Q9BY60 117 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 C1orf198Q9H425 327 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 MRPL22Q9NWU5 206 aaKnown RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 EIF3KQ9UBQ5 218 aaKnown RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 NKX1-2Q9UD57 310 aaPredicted RBP12.62□□□□□ -0.39
SGCE-204ENST00000428696 APCP25054 2843 aa12.62□□□□□ -0.39
SGCE-204ENST00000428696 GLCEO94923 617 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 LCKP06239 509 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 PEX2P28328 305 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 BLVRAP53004 296 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 CDC42P60953 191 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 HGFACQ04756 655 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 SNTB2Q13425 540 aaKnown RBP12.61□□□□□ -0.39
SGCE-204ENST00000428696 TAF13Q15543 124 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 C12orf73Q69YU5 71 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 CDH24Q86UP0 819 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 FBXL14Q8N1E6 418 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 PAQR4Q8N4S7 273 aaPredicted RBP12.61□□□□□ -0.39
SGCE-204ENST00000428696 ZNF555Q8NEP9 628 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 OR6N2Q8NGY6 317 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 SLC7A6Q92536 515 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 UBE2FQ969M7 185 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 ZNF75AQ96N20 296 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 INTS14Q96SY0 518 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 MBOAT4Q96T53 435 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 CENPMQ9NSP4 180 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 FAIMQ9NVQ4 179 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 FZR1Q9UM11 496 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 GRIP1Q9Y3R0 1128 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 GMPPBQ9Y5P6 360 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 LHFPL6Q9Y693 200 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 ROS1P08922 2347 aa12.61□□□□□ -0.39
SGCE-204ENST00000428696 POLQO75417 2590 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 LOC100509620A0A075B734 347 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 RAF1P04049 648 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 OR4A8P0C604 315 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 THBS4P35443 961 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 NAA10P41227 235 aaPredicted RBP12.6□□□□□ -0.39
SGCE-204ENST00000428696 ENTPD1P49961 510 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 SLC34A1Q06495 639 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 VASH1Q7L8A9 365 aaPredicted RBP12.6□□□□□ -0.39
SGCE-204ENST00000428696 DCXRQ7Z4W1 244 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 ZNF611Q8N823 705 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 OR1F12Q8NHA8 337 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 TMEM163Q8TC26 289 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 CYGBQ8WWM9 190 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 DHRS9Q9BPW9 319 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 CA10Q9NS85 328 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 ST6GALNAC2Q9UJ37 374 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
SGCE-204ENST00000428696 N6AMT1Q9Y5N5 214 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 COMMD3-BMI1R4GMX3 469 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 CADP27708 2225 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
SGCE-204ENST00000428696 HRNRQ86YZ3 2850 aaPredicted RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 SPG11Q96JI7 2443 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 MRPL3P09001 348 aaKnown RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 ZNF35P13682 527 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 NR4A1P22736 598 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 APOBEC3AP31941 199 aaPredicted RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 GGT2P36268 569 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 RAD52P43351 418 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 EIF2B1Q14232 305 aaKnown RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
SGCE-204ENST00000428696 ELFN2Q5R3F8 820 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 SLC18B1Q6NT16 456 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 ARL9Q6T311 187 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 CFAP77Q6ZQR2 320 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 MUC15Q8N387 334 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 THEM6Q8WUY1 208 aa12.59□□□□□ -0.39
SGCE-204ENST00000428696 TMEM171Q8WVE6 324 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms