RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 NKAIN3Q8N8D7 197 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 ZFP62Q8NB50 900 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-204ENST00000428026 OR13C8Q8NGS7 320 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 SLC6A18Q96N87 628 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 GHRLQ9UBU3 117 aa13.26□□□□□ -0.29
PTPRU-204ENST00000428026 HMGN4O00479 90 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 SDCBPO00560 298 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-204ENST00000428026 DFFBO76075 338 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 ZNF385BQ569K4 471 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 MARCH3Q86UD3 253 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 FGF14Q92915 247 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 PISDQ9UG56 409 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 BLACEA4D250 179 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 FCGR2CP31995 323 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 CCR2P41597 374 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 MAP2K6P52564 334 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 SEMA3BQ13214 749 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 OTPQ5XKR4 325 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 PIGLQ9Y2B2 252 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 B3GALT5Q9Y2C3 310 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 H7BYZ3 331 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 CYB5BO43169 146 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-204ENST00000428026 RPS27P42677 84 aaKnown RBP13.25□□□□□ -0.29
PTPRU-204ENST00000428026 TGFBR3Q03167 851 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 TAF9Q16594 264 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 DUSP5Q16690 384 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 OPN5Q6U736 354 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 RBMXL3Q8N7X1 1067 aaKnown RBP13.25□□□□□ -0.29
PTPRU-204ENST00000428026 NAT6Q93015 286 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 SRRQ9GZT4 340 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 ASIC5Q9NY37 505 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 SLC23A1Q9UHI7 598 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 TRAV20A0A0B4J274 112 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 DCTDP32321 178 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 CSNK1G2P78368 415 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 HYAL1Q12794 435 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 ABHD17CQ6PCB6 329 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 PRSS35Q8N3Z0 413 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 LFNGQ8NES3 379 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 MTCH1Q9NZJ7 389 aa13.25□□□□□ -0.29
PTPRU-204ENST00000428026 HIST1H1CP16403 213 aaKnown RBP13.24□□□□□ -0.29
PTPRU-204ENST00000428026 NTF3P20783 257 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 NKX2-1P43699 371 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-204ENST00000428026 SLC35D3Q5M8T2 416 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 AAED1Q7RTV5 226 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 FBXW5Q969U6 566 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 SPACA5Q96QH8 159 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 NRSN2Q9GZP1 204 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 CRISPLD2Q9H0B8 497 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 SPNS1Q9H2V7 528 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 ASH2LQ9UBL3 628 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 F5P12259 2224 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 ST8SIA3O43173 380 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 SOD1P00441 154 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 CD3DP04234 171 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 SRFP11831 508 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 PSMB6P28072 239 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 DCAF7P61962 342 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 APH1BQ8WW43 257 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 DUS3LQ96G46 650 aaKnown RBP13.24□□□□□ -0.29
PTPRU-204ENST00000428026 HEYLQ9NQ87 328 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-204ENST00000428026 TRMT12Q53H54 448 aaKnown RBP13.24□□□□□ -0.29
PTPRU-204ENST00000428026 VHLLQ6RSH7 139 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 TEX261Q6UWH6 196 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 DBX2Q6ZNG2 339 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 NAXDQ8IW45 347 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 ISG20L2Q9H9L3 353 aaKnown RBP13.24□□□□□ -0.29
PTPRU-204ENST00000428026 U3KQ87 197 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 AQP7O14520 342 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 CHRNB4P30926 498 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 BAMBIQ13145 260 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 CTF1Q16619 201 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 S100A7AQ86SG5 101 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 OR4N2Q8NGD1 307 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 BTF3L4Q96K17 158 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 MYOTQ9UBF9 498 aa13.24□□□□□ -0.29
PTPRU-204ENST00000428026 DHCR7Q9UBM7 475 aaKnown RBP13.24□□□□□ -0.29
PTPRU-204ENST00000428026 LRP5LA4QPB2 252 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 PRRT4C9JH25 899 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 G0S2P27469 103 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 TMEM81Q6P7N7 255 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 UCN3Q969E3 161 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 WDR89Q96FK6 387 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 LAMB1P07942 1786 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 MN1Q10571 1320 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ENSAO43768 121 aaKnown RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 SLCO2B1O94956 709 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 NQO2P16083 231 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 RFX2P48378 723 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ACKR1Q16570 336 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ASTLQ6HA08 431 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ZNF620Q6ZNG0 422 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 C19orf47Q8N9M1 422 aaKnown RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 NUDCD2Q8WVJ2 157 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ZNF2Q9BSG1 426 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 P2RY12Q9H244 342 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 SRPK3Q9UPE1 567 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 LOC107986453A0A1B0GWG9 222 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms