RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 HIST1H3AP68431 136 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 PLP2Q04941 152 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 BLMHQ13867 455 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 HIST2H3PS2Q5TEC6 136 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 SLC18B1Q6NT16 456 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 HIST2H3AQ71DI3 136 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 CDC20BQ86Y33 519 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 OR2T27Q8NH04 317 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 FGFBP3Q8TAT2 258 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 C1orf198Q9H425 327 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 CNOT2Q9NZN8 540 aaKnown RBP13.44□□□□□ -0.26
COL11A1-204ENST00000427239 A0A1W2PR80 420 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 EFCAB10A6NFE3 127 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 IGKV3-15P01624 115 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 MRPL3P09001 348 aaKnown RBP13.44□□□□□ -0.26
COL11A1-204ENST00000427239 PATE4P0C8F1 98 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 PSG4Q00888 419 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 C3orf36Q3SXR2 165 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 OTPQ5XKR4 325 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 C22orf34Q6ZV56 151 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 LGALS12Q96DT0 336 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 YTHDF1Q9BYJ9 559 aaKnown RBP13.44□□□□□ -0.26
COL11A1-204ENST00000427239 OR2H1Q9GZK4 316 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 UBAP1Q9NZ09 502 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 LAMP5Q9UJQ1 280 aa13.44□□□□□ -0.26
COL11A1-204ENST00000427239 GDF2Q9UK05 429 aaPredicted RBP13.44□□□□□ -0.26
COL11A1-204ENST00000427239 ZNF503-AS2A6NEH8 195 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 J3QRE1 110 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 PHYHO14832 338 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 RER1O15258 196 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 SGCEO43556 437 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 SERPINA5P05154 406 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 LYNP07948 512 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 PIPP12273 146 aaPredicted RBP13.43□□□□□ -0.26
COL11A1-204ENST00000427239 IGFBP2P18065 325 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 ALOX5APP20292 161 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 DCKP27707 260 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 RPS27P42677 84 aaKnown RBP13.43□□□□□ -0.26
COL11A1-204ENST00000427239 TUBA1BP68363 451 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 TUBA4AP68366 448 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 PABPC1L2AQ5JQF8 200 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 RBM48Q5RL73 367 aaKnown RBP13.43□□□□□ -0.26
COL11A1-204ENST00000427239 CORO6Q6QEF8 472 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 TUBA1AQ71U36 451 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 DCXRQ7Z4W1 244 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 MDP1Q86V88 176 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 LINC00346Q8IVM7 164 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 DMRTC2Q8IXT2 367 aaPredicted RBP13.43□□□□□ -0.26
COL11A1-204ENST00000427239 SLC35F2Q8IXU6 374 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 ZNF540Q8NDQ6 660 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 OR4F15Q8NGB8 312 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 LINC01560Q8TB33 94 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 ASB17Q8WXJ9 295 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 GGHQ92820 318 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 PLEK2Q9NYT0 353 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 CRNNQ9UBG3 495 aaPredicted RBP13.43□□□□□ -0.26
COL11A1-204ENST00000427239 PSORS1C1Q9UIG5 152 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 BLOC1S6Q9UL45 172 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 TPRKBQ9Y3C4 175 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 CACNA1CQ13936 2221 aa13.43□□□□□ -0.26
COL11A1-204ENST00000427239 UTP20O75691 2785 aaKnown RBP13.42□□□□□ -0.26
COL11A1-204ENST00000427239 IQCMA0A1B0GVH7 501 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 SLC1A7O00341 560 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 CASKO14936 926 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 XPNPEP2O43895 674 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 FAM20BO75063 409 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 THBDP07204 575 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 COX5BP10606 129 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 EPXP11678 715 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 KIR2DL3P43628 341 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ACTC1P68032 377 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ACTA1P68133 377 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ECH1Q13011 328 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 EIF2B1Q14232 305 aaKnown RBP13.42□□□□□ -0.26
COL11A1-204ENST00000427239 KCTD18Q6PI47 426 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ZNF786Q8N393 782 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ACBD7Q8N6N7 88 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 IL17RDQ8NFM7 739 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ST7LQ8TDW4 575 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 THEM6Q8WUY1 208 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ZNF75AQ96N20 296 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ABHD6Q9BV23 337 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 HDHD2Q9H0R4 259 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 FGF20Q9NP95 211 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ATPIF1Q9UII2 106 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 LRCH1Q9Y2L9 728 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 PCDHGB5Q9Y5G0 923 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 PRSS44E7EML9 344 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 C19orf84I3L1E1 186 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 IGLV1-44P01699 117 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ZNF14P17017 642 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-204ENST00000427239 CRHBPP24387 322 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 HCCSP53701 268 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ST3GAL4Q11206 333 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 RAB35Q15286 201 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 CCDC92Q53HC0 331 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ELFN2Q5R3F8 820 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 ACBD4Q8NC06 268 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 OR10H4Q8NGA5 316 aa13.42□□□□□ -0.26
COL11A1-204ENST00000427239 IPCEF1Q8WWN9 437 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms