RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RALGAPA1Q6GYQ0 2036 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 A0A0B4J2A0 478 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 CCDC163A0A0D9SF12 145 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 GGT3PA6NGU5 568 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 OGG1O15527 345 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 FARS2O95363 451 aaKnown RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 CD34P28906 385 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 RORAP35398 523 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 RNASE10Q5GAN6 216 aaKnown RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 NKAPLQ5M9Q1 402 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 SLC16A9Q7RTY1 509 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 PDZD9Q8IXQ8 264 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 DUSP15Q9H1R2 295 aaPredicted RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 SLC6A15Q9H2J7 730 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 TREM1Q9NP99 234 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 CTSFQ9UBX1 484 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 SHPKQ9UHJ6 478 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 A0A087WV62 115 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 AKAIN1P0CW23 69 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 PPP3CBP16298 524 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 EPHA4P54764 986 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 HLXQ14774 488 aaPredicted RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 SGCAQ16586 387 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 GPR139Q6DWJ6 353 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 SLC18B1Q6NT16 456 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 ZCCHC12Q6PEW1 402 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 GLDNQ6ZMI3 551 aaPredicted RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 SLC29A4Q7RTT9 530 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 C17orf82Q86X59 251 aaPredicted RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 C12orf45Q8N5I9 185 aaPredicted RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 OR2AK2Q8NG84 335 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 HAVCR1Q96D42 359 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 SORCS2Q96PQ0 1159 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 NUDT9Q9BW91 350 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 PLEKHA1Q9HB21 404 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 FSCN3Q9NQT6 498 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 NBASA2RRP1 2371 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 IGKV1D-42A0A075B6H8 117 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 TRAV1-2A0A0B4J238 106 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 OR5K4A6NMS3 321 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 GPRIN2O60269 458 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 NPY4RP50391 375 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 IL13RA1P78552 427 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 TLE3Q04726 772 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 ACSM1Q08AH1 577 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 CLPPQ16740 277 aaPredicted RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 CDCP2Q5VXM1 449 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 KLHL24Q6TFL4 600 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.04□□□□□ -0.48
USP42-203ENST00000426246 NUP54Q7Z3B4 507 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 ARHGEF39Q8N4T4 335 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 SLC2A12Q8TD20 617 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 SLC41A2Q96JW4 573 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 ABHD6Q9BV23 337 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 CUTCQ9NTM9 273 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 STEAP1Q9UHE8 339 aa12.04□□□□□ -0.48
USP42-203ENST00000426246 F5H5K5 113 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 FADS1O60427 444 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 HTR2CP28335 458 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 CEBPEQ15744 281 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 GLT8D1Q68CQ7 371 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 AWAT2Q6E213 333 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 BPHLQ86WA6 291 aaPredicted RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 PRSS35Q8N3Z0 413 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 OR1J4Q8NGS1 313 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 MIB2Q96AX9 1013 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 GPR137Q96N19 417 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 METTL8Q9H825 291 aaKnown RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 ZNF701Q9NV72 531 aaPredicted RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 RIF1Q5UIP0 2472 aaKnown RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 TMED7-TICAM2A0A0A6YYA0 188 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 A0A1W2PP11 408 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 hCG_1807616A0A1W2PRN6 198 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 B8ZZF3 427 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 MCRIP1C9JLW8 97 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 HOXB5P09067 269 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 HSD11B1P28845 292 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 EGR4Q05215 589 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 ABHD12BQ7Z5M8 362 aaPredicted RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 SYS1Q8N2H4 156 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 WDR77Q9BQA1 342 aaPredicted RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 GPR160Q9UJ42 338 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 TMED7Q9Y3B3 224 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 MASP2O00187 686 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 CTAG2O75638 210 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 AKR1C3P42330 323 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 BLKP51451 505 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 GK2Q14410 553 aaPredicted RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 TMEM225Q6GV28 225 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 ZNF704Q6ZNC4 412 aaPredicted RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 MAMDC2Q7Z304 686 aaPredicted RBP12.03□□□□□ -0.48
USP42-203ENST00000426246 TRAPPC6BQ86SZ2 158 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 LRRC18Q8N456 261 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 HEXA-AS1Q9H8Q6 139 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 SUSD2Q9UGT4 822 aa12.03□□□□□ -0.48
USP42-203ENST00000426246 DLSTP36957 453 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms