RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SLC43A1O75387 559 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 NCR1O76036 304 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 CPN1P15169 458 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 MAPK3P27361 379 aaPredicted RBP13.43□□□□□ -0.26
ACTB-204ENST00000425660 TNFSF8P32971 234 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 HSD17B12Q53GQ0 312 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 SPANXN2Q5MJ10 180 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 DDI2Q5TDH0 399 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 ZNF544Q6NX49 715 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 C16orf87Q6PH81 154 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 CFAP77Q6ZQR2 320 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 CATSPERDQ86XM0 798 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 LAX1Q8IWV1 398 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 PARP16Q8N5Y8 322 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 SNIP1Q8TAD8 396 aaKnown RBP13.43□□□□□ -0.26
ACTB-204ENST00000425660 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 THRSPQ92748 146 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 KCTD12Q96CX2 325 aaKnown RBP13.43□□□□□ -0.26
ACTB-204ENST00000425660 ULBP2Q9BZM5 246 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 RNF122Q9H9V4 155 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 EMC7Q9NPA0 242 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 NOX4Q9NPH5 578 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 ASH2LQ9UBL3 628 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 TRGV5A0A0B4J1U4 118 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 RGS5O15539 181 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 IGHG3P01860 377 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 RAF1P04049 648 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 SRMP19623 302 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 MSR1P21757 451 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 GUCA1AP43080 201 aaPredicted RBP13.43□□□□□ -0.26
ACTB-204ENST00000425660 SRYQ05066 204 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 MFGE8Q08431 387 aaPredicted RBP13.43□□□□□ -0.26
ACTB-204ENST00000425660 CEP78Q5JTW2 689 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 SFXN4Q6P4A7 337 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 SPATC1Q76KD6 591 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 AAED1Q7RTV5 226 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 ZNF676Q8N7Q3 588 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 ACOT12Q8WYK0 555 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 SLC30A2Q9BRI3 323 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 SCNM1Q9BWG6 230 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 MIXL1Q9H2W2 232 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 PNRC2Q9NPJ4 139 aaKnown RBP13.43□□□□□ -0.26
ACTB-204ENST00000425660 FBXL3Q9UKT7 428 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 MCTS1Q9ULC4 181 aaKnown RBP13.43□□□□□ -0.26
ACTB-204ENST00000425660 ZNF878C9JN71 531 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 ISG15P05161 165 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 H2BFMP0C1H6 154 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 OCM2P0CE71 109 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 RAB3BP20337 219 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 MRPS34P82930 218 aaKnown RBP13.42□□□□□ -0.26
ACTB-204ENST00000425660 OR2AJ1Q8NGZ0 328 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 ZNF775Q96BV0 537 aaPredicted RBP13.42□□□□□ -0.26
ACTB-204ENST00000425660 BCO1Q9HAY6 547 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 ABCB9Q9NP78 766 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 G6PC2Q9NQR9 355 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 PCDHGA9Q9Y5G4 932 aaKnown RBP13.42□□□□□ -0.26
ACTB-204ENST00000425660 CACNA1CQ13936 2221 aa13.42□□□□□ -0.26
ACTB-204ENST00000425660 TRBV5-7A0A0A0MS05 114 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 A0A1W2PPK0 400 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ANKRD61A6NGH8 418 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ACOD1A6NK06 481 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 SYNGR4O95473 234 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ZNF24P17028 368 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 THBS2P35442 1172 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ZNF84P51523 738 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 OR10A3P58181 314 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.41□□□□□ -0.26
ACTB-204ENST00000425660 CPT1CQ8TCG5 803 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 WDYHV1Q96HA8 205 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 CEP19Q96LK0 163 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ZNF416Q9BWM5 594 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 DEFB127Q9H1M4 99 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 NIPAL2Q9H841 368 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 CENPMQ9NSP4 180 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 FAM206AQ9NX38 181 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 SPRR3Q9UBC9 169 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 SLC22A13Q9Y226 551 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 POLR1DQ9Y2S0 133 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 EMC9Q9Y3B6 208 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 V9GYH0 126 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 SPENQ96T58 3664 aaKnown RBP13.41□□□□□ -0.26
ACTB-204ENST00000425660 TMEM269A0A1B0GVZ9 245 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 NOTOA8MTQ0 251 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ZNF724A8MTY0 619 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 LOC110117498-PIK3R3F6TDL0 507 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 TMEM127O75204 238 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 NPR2P20594 1047 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 PPP3R1P63098 170 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 HIST1H3AP68431 136 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ENDOGQ14249 297 aaKnown RBP13.41□□□□□ -0.26
ACTB-204ENST00000425660 HIST2H3PS2Q5TEC6 136 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 FAM27BQ5VT28 67 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 HIST2H3AQ71DI3 136 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 RDH10Q8IZV5 341 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 OR51A4Q8NGJ6 313 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 OR10AC1Q8NH08 325 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 FNDC9Q8TBE3 224 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 HTRA1Q92743 480 aa13.41□□□□□ -0.26
ACTB-204ENST00000425660 ZNF837Q96EG3 531 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms