RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TLCD1Q96CP7 247 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SMIM19Q96E16 107 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 RCHY1Q96PM5 261 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OR8B4Q96RC9 309 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TSNAXQ99598 290 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 KCTD14Q9BQ13 255 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 DDA1Q9BW61 102 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 FAIM2Q9BWQ8 316 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TRIM4Q9C037 500 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SHARPINQ9H0F6 387 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 ARL6Q9H0F7 186 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 OR51B5Q9H339 312 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM38AQ9H6F2 299 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CAB39LQ9H9S4 337 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SIAEQ9HAT2 523 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 RDH14Q9HBH5 336 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 FBXO8Q9NRD0 319 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 INTS9Q9NV88 658 aaKnown RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 PARVAQ9NVD7 372 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 CMTM6Q9NX76 183 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 B3GNT2Q9NY97 397 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 WRAP73Q9P2S5 460 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF580Q9UK33 172 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 SPATA31D1Q6ZQQ2 1576 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 TNRQ92752 1358 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 PLEKHH1Q9ULM0 1364 aa3.12□□□□□ -1.91
SF3B1-205ENST00000424674 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 A0A1W2PPI3 338 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF729A6NN14 1252 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 USP27XA6NNY8 438 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 C21orf140B9A014 251 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 PRSS44E7EML9 344 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 C11orf98E9PRG8 122 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 F5H768 121 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 KCNK1O00180 336 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF593O00488 134 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 KMOO15229 486 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 MRPS12O15235 138 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ENSAO43768 121 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 MPZL2O60487 215 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 SLC16A7O60669 478 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 GATBO75879 557 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ATP6V1G2O95670 118 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 OAS1P00973 400 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CRYAAP02489 173 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ZDHHC11BP0C7U3 371 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 LIMS3P0CW19 117 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 LIMS4P0CW20 117 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CT45A6P0DMU7 189 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CT45A5P0DMU8 189 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CT45A7P0DMV0 189 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 UGT2B7P16662 529 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 IGFBP3P17936 291 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 F8A1P23610 371 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 PSMA1P25786 263 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CALML3P27482 149 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 HTR1DP28221 377 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TIMP3P35625 211 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 DCTP40126 519 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 OR3A2P47893 321 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 HCAR3P49019 387 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 BTG1P62324 171 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 RPL8P62917 257 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 RPL19P84098 196 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TFAMQ00059 246 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 SP4Q02446 784 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF85Q03923 595 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TNFRSF9Q07011 255 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TFDP2Q14188 446 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 KIR2DS3Q14952 304 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ABRAXAS2Q15018 415 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TTLL9Q3SXZ7 439 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 UNC50Q53HI1 259 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 SPIN4Q56A73 249 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CARD16Q5EG05 197 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CT45A1Q5HYN5 189 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 PVRIGQ6DKI7 326 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 RWDD4Q6NW29 188 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 Q6ZT83 130 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 FAM92BQ6ZTR7 304 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 LYG2Q86SG7 212 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 RALGPS2Q86X27 583 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 PRSS58Q8IYP2 241 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 WDR31Q8NA23 367 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 OR4D10Q8NGI6 311 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 OR2AE1Q8NHA4 323 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CT45A3Q8NHU0 189 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 ACTRT1Q8TDG2 376 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 NDRG1Q92597 394 aaKnown RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TESCQ96BS2 214 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 RAB3CQ96E17 227 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 SEC22AQ96IW7 307 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 KCTD7Q96MP8 289 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 SORT1Q99523 831 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 SDHCQ99643 169 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-205ENST00000424674 GPR21Q99679 349 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 TRIM15Q9C019 465 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 CHRNA10Q9GZZ6 450 aa3.11□□□□□ -1.91
SF3B1-205ENST00000424674 FAM107BQ9H098 131 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms