RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CHEK2O96017 543 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 HPRP00739 348 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 IGF2P01344 180 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 NR2F1P10589 423 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 ZNF32P17041 273 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 IMPDH1P20839 514 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 PAX6P26367 422 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 PSMB10P40306 273 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 LUMP51884 338 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-203ENST00000424270 ERVK-25P63136 954 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 HBA1P69905 142 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 IL5RAQ01344 420 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 PUDPQ08623 228 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 ACSM1Q08AH1 577 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 BLMHQ13867 455 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 PTGR1Q14914 329 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 NPTX1Q15818 432 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 SGCAQ16586 387 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 NCR3LG1Q68D85 454 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 Q6ZR03 302 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 COLCA1Q6ZS62 124 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 CYS1Q717R9 158 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 NET1Q7Z628 596 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-203ENST00000424270 TMEM219Q86XT9 240 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 SLC22A9Q8IVM8 553 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 TMEM151AQ8N4L1 468 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 NATD1Q8N6N6 113 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 BHLHE23Q8NDY6 225 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 OR13G1Q8NGZ3 307 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 IL17DQ8TAD2 202 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 AENQ8WTP8 325 aaKnown RBP5.12□□□□□ -1.59
SDCBP-203ENST00000424270 C10orf82Q8WW14 230 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 CAPSLQ8WWF8 208 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 H1FXQ92522 213 aaKnown RBP5.12□□□□□ -1.59
SDCBP-203ENST00000424270 TAAR8Q969N4 342 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 TUBGCP3Q96CW5 907 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 METTL2AQ96IZ6 378 aaKnown RBP5.12□□□□□ -1.59
SDCBP-203ENST00000424270 POM121L2Q96KW2 1035 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 ZNF582Q96NG8 517 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-203ENST00000424270 DPH5Q9H2P9 285 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 ARMC7Q9H6L4 198 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 SMURF1Q9HCE7 757 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 TRIM36Q9NQ86 728 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 UFSP2Q9NUQ7 469 aa5.12□□□□□ -1.59
SDCBP-203ENST00000424270 ZNF256Q9Y2P7 627 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-203ENST00000424270 TRAV36DV7A0A075B6V5 113 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 LOC100509620A0A075B734 347 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 TRAV38-1A0A0B4J264 116 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 LOC102725191A0A1B0GVB3 256 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 A0A1W2PQ09 198 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 MEGF11A6BM72 1044 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 NPIPB8E9PQR5 432 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 EIF3HO15372 352 aaKnown RBP eCLIP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 RNF13O43567 381 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 NPHS1O60500 1241 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 NPIPB7O75200 414 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 CPSF4O95639 269 aaKnown RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 GYPAP02724 150 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 LINC00032P0C843 101 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 ADORA3P0DMS8 318 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 NEFHP12036 1026 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 ATP5F1P24539 256 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 POU1F1P28069 291 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 GUCA1AP43080 201 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 UBE2E1P51965 193 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 GP2P55259 537 aaKnown RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 LGALS4P56470 323 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 PLAURQ03405 335 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 MELKQ14680 651 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 MS4A18Q3C1V0 323 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 LIN52Q52LA3 116 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 RFTN2Q52LD8 501 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 METAP1DQ6UB28 335 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 C5orf46Q6UWT4 87 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 ANKFN1Q8N957 763 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 PSMA8Q8TAA3 256 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 ACTRT1Q8TDG2 376 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 TMEM54Q969K7 222 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 EPYCQ99645 322 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 DUSP26Q9BV47 211 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 NUF2Q9BZD4 464 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 MTHFD2LQ9H903 347 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 MARCOQ9UEW3 520 aaPredicted RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 TMED5Q9Y3A6 229 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 SF3B6Q9Y3B4 125 aaKnown RBP5.11□□□□□ -1.59
SDCBP-203ENST00000424270 CAPN7Q9Y6W3 813 aa5.11□□□□□ -1.59
SDCBP-203ENST00000424270 hCG_1807616A0A1W2PRN6 198 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 WDR91A4D1P6 747 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 GOLGA6L6A8MZA4 724 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 MCIDASD6RGH6 385 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 H0YAE9 185 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 LGALS8O00214 317 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 HDAC3O15379 428 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 NDUFA2O43678 99 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 FAM20BO75063 409 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 GLCEO94923 617 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 IGHG1P01857 330 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 IFNA6P05013 189 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 GUSBP08236 651 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 FRMD6-AS1P0C7T7 363 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms