RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 NME1P15531 152 aaKnown RBP12.9□□□□□ -0.34
MSH5-206ENST00000423982 ZNF10P21506 573 aaPredicted RBP12.9□□□□□ -0.34
MSH5-206ENST00000423982 CENPAP49450 140 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 FLI1Q01543 452 aaPredicted RBP12.9□□□□□ -0.34
MSH5-206ENST00000423982 HHEXQ03014 270 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 EGR4Q05215 589 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 RPL18Q07020 188 aaKnown RBP12.9□□□□□ -0.34
MSH5-206ENST00000423982 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
MSH5-206ENST00000423982 RAB11BQ15907 218 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 ZNF74Q16587 644 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 SLC22A6Q4U2R8 563 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 GLT8D1Q68CQ7 371 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 SLC43A2Q8N370 569 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 KCNRGQ8N5I3 272 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 OR1J4Q8NGS1 313 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
MSH5-206ENST00000423982 C4orf45Q96LM5 186 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 SLC6A7Q99884 636 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 FAM117AQ9C073 453 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 ESRP2Q9H6T0 727 aaKnown RBP12.9□□□□□ -0.34
MSH5-206ENST00000423982 ELOVL3Q9HB03 270 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 HEBP2Q9Y5Z4 205 aa12.9□□□□□ -0.34
MSH5-206ENST00000423982 SERINC4A6NH21 518 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 OR6C76A6NM76 312 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 SNAPC5O75971 98 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 ATG12O94817 140 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 PLGP00747 810 aaPredicted RBP12.9□□□□□ -0.35
MSH5-206ENST00000423982 CT45A8P0DMV1 189 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 CT45A9P0DMV2 189 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 AVPR2P30518 371 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 DLSTP36957 453 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 PRPS1P60891 318 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 BTG2P78543 158 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 CT45A2Q5DJT8 189 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 MANEAQ5SRI9 462 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 C3orf33Q6P1S2 294 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 FAM219AQ8IW50 185 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 CSNK1A1LQ8N752 337 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 OR5M8Q8NGP6 311 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 NKD1Q969G9 470 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 TMEM231Q9H6L2 316 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 POLE3Q9NRF9 147 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 GRHPRQ9UBQ7 328 aa12.9□□□□□ -0.35
MSH5-206ENST00000423982 KIF26BQ2KJY2 2108 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 FREM3P0C091 2139 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 DCDC2BA2VCK2 349 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 TMEM235A6NFC5 223 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 CDC40O60508 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
MSH5-206ENST00000423982 SRPX2O60687 465 aaPredicted RBP12.89□□□□□ -0.35
MSH5-206ENST00000423982 HLA-DQA2P01906 255 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 CD34P28906 385 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 SDHAP31040 664 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 ZNF141Q15928 474 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 MEP1BQ16820 701 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 C11orf87Q6NUJ2 197 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 TMEM17Q86X19 198 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 LMF2Q9BU23 707 aaKnown RBP12.89□□□□□ -0.35
MSH5-206ENST00000423982 DNTTIP1Q9H147 329 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 FAM60AQ9NP50 221 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 VSIG4Q9Y279 399 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 MRPS18BQ9Y676 258 aaKnown RBP12.89□□□□□ -0.35
MSH5-206ENST00000423982 DMXL1Q9Y485 3027 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 LOC100289279A0A1B0GTE1 492 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 TMEM212A6NML5 194 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 C11orf98E9PRG8 122 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 BCL2L11O43521 198 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 TNFSF14O43557 240 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 ZNF735P0CB33 412 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 MFGE8Q08431 387 aaPredicted RBP12.89□□□□□ -0.35
MSH5-206ENST00000423982 RIPPLY1Q0D2K3 151 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 KIR2DS3Q14952 304 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 ELOCQ15369 112 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 HFEQ30201 348 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 GLYATL3Q5SZD4 288 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 C1QL3Q5VWW1 255 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 CORO6Q6QEF8 472 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 RTN4RL2Q86UN3 420 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 FAM174AQ8TBP5 190 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 SLC22A18Q96BI1 424 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 MMP25Q9NPA2 562 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 MLXQ9UH92 298 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 KLK13Q9UKR3 277 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
MSH5-206ENST00000423982 PCNX3Q9H6A9 2034 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 A0A0A6YYC8 382 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 A0A0D9SG52 128 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 A0A1B0GTI1 187 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 CPED1A4D0V7 1026 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 I3L1I5 382 aaPredicted RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 CD8AP01732 235 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 SLC35E2P0CK97 266 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 SLC25A1P53007 311 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 SNTB1Q13884 538 aaKnown RBP12.88□□□□□ -0.35
MSH5-206ENST00000423982 BPIFB2Q8N4F0 458 aa12.88□□□□□ -0.35
MSH5-206ENST00000423982 RSC1A1Q92681 617 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms