RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 RDH5Q92781 318 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 NSL1Q96IY1 281 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 BTBD10Q9BSF8 475 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 RACGAP1Q9H0H5 632 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 CHODLQ9H9P2 273 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 KRCC1Q9NPI7 259 aaPredicted RBP13.19□□□□□ -0.3
SPC24-201ENST00000423327 VNN3Q9NY84 501 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 FAM53CQ9NYF3 392 aa13.19□□□□□ -0.3
SPC24-201ENST00000423327 TANC2Q9HCD6 1990 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 COL6A5A8TX70 2615 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 LOC100289279A0A1B0GTE1 492 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 ARPC3O15145 178 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 KHDRBS3O75525 346 aaKnown RBP13.18□□□□□ -0.3
SPC24-201ENST00000423327 COX5BP10606 129 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 HIST1H1CP16403 213 aaKnown RBP13.18□□□□□ -0.3
SPC24-201ENST00000423327 ACHEP22303 614 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 RPS6KA3P51812 740 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 SMIM11AP58511 58 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 PPP1CBP62140 327 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 AQP6Q13520 282 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 CCNIQ14094 377 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 MEP1BQ16820 701 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 CHRFAM7AQ494W8 412 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 CCDC92Q53HC0 331 aaPredicted RBP13.18□□□□□ -0.3
SPC24-201ENST00000423327 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
SPC24-201ENST00000423327 FAM166AQ6J272 317 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 LCN8Q6JVE9 175 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 KLF14Q8TD94 323 aaPredicted RBP13.18□□□□□ -0.3
SPC24-201ENST00000423327 MCUR1Q96AQ8 359 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 C1orf159Q96HA4 380 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 C4orf45Q96LM5 186 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 SAMD8Q96LT4 415 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 ERMAPQ96PL5 475 aaPredicted RBP13.18□□□□□ -0.3
SPC24-201ENST00000423327 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 RERGLQ9H628 205 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 ASH2LQ9UBL3 628 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 CACNG2Q9Y698 323 aa13.18□□□□□ -0.3
SPC24-201ENST00000423327 OR6C6A6NF89 314 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 RER1O15258 196 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 SGCEO43556 437 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 IGHV1-46P01743 117 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 GUCA1AP43080 201 aaPredicted RBP13.17□□□□□ -0.3
SPC24-201ENST00000423327 HTR5AP47898 357 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 CHN2P52757 468 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 HMGA2P52926 109 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 LSM6P62312 80 aaKnown RBP13.17□□□□□ -0.3
SPC24-201ENST00000423327 MRPS11P82912 194 aaKnown RBP13.17□□□□□ -0.3
SPC24-201ENST00000423327 SCRN3Q0VDG4 424 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 PPP1R8Q12972 351 aaKnown RBP13.17□□□□□ -0.3
SPC24-201ENST00000423327 KCNMB1Q16558 191 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 SPRNQ5BIV9 151 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 LEG1Q6P5S2 330 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 GLB1L2Q8IW92 636 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 ALDH16A1Q8IZ83 802 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 OR6V1Q8N148 313 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 CCDC197Q8NCU1 140 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 OR8D4Q8NGM9 314 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 CLDND2Q8NHS1 167 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 CLPTM1LQ96KA5 538 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 WACQ9BTA9 647 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 PLA2G12AQ9BZM1 189 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 FN3KQ9H479 309 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 NARFLQ9H6Q4 476 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 EGLN3Q9H6Z9 239 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 NKIRAS2Q9NYR9 191 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 NDRG4Q9ULP0 352 aaKnown RBP13.17□□□□□ -0.3
SPC24-201ENST00000423327 KCNS2Q9ULS6 477 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 LHFPL6Q9Y693 200 aa13.17□□□□□ -0.3
SPC24-201ENST00000423327 CDC14BO60729 498 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 DBHP09172 617 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 CALB2P22676 271 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 SLC6A6P31641 620 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 RBMXP38159 391 aaKnown RBP13.16□□□□□ -0.3
SPC24-201ENST00000423327 GPR6P46095 362 aaPredicted RBP13.16□□□□□ -0.3
SPC24-201ENST00000423327 ERFP50548 548 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 MNAT1P51948 309 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 CDH15P55291 814 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 SELENOVP59797 346 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 HIST1H3AP68431 136 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 TSPAN31Q12999 210 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 ZNF718Q3SXZ3 478 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 HIST2H3PS2Q5TEC6 136 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 TMEM154Q6P9G4 183 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 HIST2H3AQ71DI3 136 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 OR4K13Q8NH42 304 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 GNPDA2Q8TDQ7 276 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 SNX33Q8WV41 574 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 HPS1Q92902 700 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 PLEK2Q9NYT0 353 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 TAS2R1Q9NYW7 299 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 EIF3KQ9UBQ5 218 aaKnown RBP13.16□□□□□ -0.3
SPC24-201ENST00000423327 B9D1Q9UPM9 204 aa13.16□□□□□ -0.3
SPC24-201ENST00000423327 MXRA5Q9NR99 2828 aa13.15□□□□□ -0.3
SPC24-201ENST00000423327 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms