RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TMEM11P17152 192 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 RPL27P61353 136 aaKnown RBP11.3□□□□□ -0.6
CLCN4-203ENST00000421085 GRB2P62993 217 aaKnown RBP11.3□□□□□ -0.6
CLCN4-203ENST00000421085 C17orf67Q0P5P2 114 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 SLC25A35Q3KQZ1 300 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 LYG2Q86SG7 212 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 SEC14L6B5MCN3 397 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 E5RGE8 158 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A8P0DMV1 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A9P0DMV2 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CTRB1P17538 263 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A2Q5DJT8 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CTRB2Q6GPI1 263 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 AKR7LQ8NHP1 331 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 SUSD2Q9UGT4 822 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 TIAM2Q8IVF5 1701 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 NXPH2O95156 264 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 CALCRP30988 508 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 CARD18P57730 90 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF85Q03923 595 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 BAMBIQ13145 260 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 ACKR1Q16570 336 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 LINC00303Q3SY05 128 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 OR10J5Q8NHC4 309 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 MARCH1Q8TCQ1 289 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 NUDCD2Q8WVJ2 157 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 TMEM184BQ9Y519 407 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-203ENST00000421085 C4AP0C0L4 1744 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SDHAP31040 664 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 GABRA4P48169 554 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 C1orf140Q5VVS0 124 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SLC35G3Q8N808 338 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 OR4C16Q8NGL9 310 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 FAM3CQ92520 227 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 HHIPQ96QV1 700 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 OR2A14Q96R47 310 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 STACQ99469 402 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 C12orf10Q9HB07 376 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 TMEM202A6NGA9 273 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 OLFM2O95897 454 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 PLEKHA2Q9HB19 425 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 LRIT1Q9P2V4 623 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 HOXC8P31273 242 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SNRPEP62304 92 aaKnown RBP11.29□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF92Q03936 586 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 XAF1Q6GPH4 301 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 CMTM2Q8TAZ6 248 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SLC35A4Q96G79 324 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 TOE1Q96GM8 510 aaKnown RBP11.29□□□□□ -0.6
CLCN4-203ENST00000421085 C2orf50Q96LR7 162 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 ABHD16AO95870 558 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 F10P00742 488 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 MMP15P51511 669 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 LIM2P55344 173 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 UBE2G2P60604 165 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 TRMT12Q53H54 448 aaKnown RBP11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SPANXN5Q5MJ07 72 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 FCRL6Q6DN72 434 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 DOK3Q7L591 496 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 H2BFWTQ7Z2G1 175 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 LRRTM1Q86UE6 522 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 GALNT16Q8N428 558 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 OR8D4Q8NGM9 314 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 LIPHQ8WWY8 451 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SMIM7Q9BQ49 75 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 SLC25A19Q9HC21 320 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 TRAPPC4Q9Y296 219 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 NOSIPQ9Y314 301 aaKnown RBP11.29□□□□□ -0.6
CLCN4-203ENST00000421085 LRP6O75581 1613 aa11.29□□□□□ -0.6
CLCN4-203ENST00000421085 RNASEK-C17orf49H0YIS7 233 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 CYBAP13498 195 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 FABP4P15090 132 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 TPBGQ13641 420 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 CDK5R1Q15078 307 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 ARRDC3Q96B67 414 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 ORAI1Q96D31 301 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 BCO1Q9HAY6 547 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 GPR173Q9NS66 373 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-203ENST00000421085 LRRC37A3O60309 1634 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 HS3ST1O14792 307 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 EFSO43281 561 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 CASP6P55212 293 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 CD300CQ08708 224 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 TCTN3Q6NUS6 607 aa11.28□□□□□ -0.6
CLCN4-203ENST00000421085 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms