RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 OPRL1P41146 370 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 HCCSP53701 268 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR12D2P58182 307 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 PCBD1P61457 104 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 SIRPAP78324 504 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 DOC2BQ14184 412 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 TRAM1Q15629 374 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 CEACAM16Q2WEN9 425 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 TIMM50Q3ZCQ8 353 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 DMKNQ6E0U4 476 aaPredicted RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 RPL22L1Q6P5R6 122 aaKnown RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 SLC22A24Q8N4F4 322 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 RFLNBQ8N5W9 214 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 C1orf162Q8NEQ5 155 aaPredicted RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 RAB2BQ8WUD1 216 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF837Q96EG3 531 aaPredicted RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 PELI1Q96FA3 418 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 C4orf36Q96KX1 117 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 MROQ9BYG7 248 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 ISG20L2Q9H9L3 353 aaKnown RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 SEC61A2Q9H9S3 476 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 UPB1Q9UBR1 384 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF629Q9UEG4 869 aaPredicted RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 CLEC4AQ9UMR7 237 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 SF3B6Q9Y3B4 125 aaKnown RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 A0A1W2PPL8 197 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 PRR32B1ATL7 298 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 E9PLN8 166 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 KRT33AO76009 404 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 FARS2O95363 451 aaKnown RBP12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 KRT8P05787 483 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 SPARCP09486 303 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 GLI4P10075 376 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 PAX7P23759 505 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 EDNRAP25101 427 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 GABRA5P31644 462 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 CDAP32320 146 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 MMP16P51512 607 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 CCR9P51686 369 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 GBX2P52951 348 aaPredicted RBP12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 EIF2B1Q14232 305 aaKnown RBP12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 P2RY6Q15077 328 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 IGFBP7Q16270 282 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 SSX1Q16384 188 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 MEP1BQ16820 701 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 LIPNQ5VXI9 398 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 DCXRQ7Z4W1 244 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 OR2AJ1Q8NGZ0 328 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 THEM6Q8WUY1 208 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 UFD1Q92890 307 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 STARD4Q96DR4 205 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 MAP6Q96JE9 813 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 TBX5Q99593 518 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 FUNDC2Q9BWH2 189 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF416Q9BWM5 594 aa12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 PNRC2Q9NPJ4 139 aaKnown RBP12.52□□□□□ -0.41
SHMT1P1-201ENST00000419974 CLEC18AA5D8T8 446 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ACOD1A6NK06 481 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF878C9JN71 531 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 J3QLW9 94 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 GPRIN2O60269 458 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 LALBAP00709 142 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 CD36P16671 472 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ZNF19P17023 458 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 OTX1P32242 354 aaPredicted RBP12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 CD79BP40259 229 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 TGFBR3Q03167 851 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 SCRN3Q0VDG4 424 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ECH1Q13011 328 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 CDK5R1Q15078 307 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 KRTAP27-1Q3LI81 207 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 PRR30Q53SZ7 412 aaPredicted RBP12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 TMEM211Q6ICI0 200 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ANKRD16Q6P6B7 361 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 CLEC18BQ6UXF7 455 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 P2RY8Q86VZ1 359 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 GABRG1Q8N1C3 465 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 MS4A15Q8N5U1 240 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 CLEC18CQ8NCF0 446 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 SMAP2Q8WU79 429 aaPredicted RBP12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 SMIM19Q96E16 107 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 AMELYQ99218 206 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 PIGMQ9H3S5 423 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ASH2LQ9UBL3 628 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ST6GALNAC2Q9UJ37 374 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 ENPP5Q9UJA9 477 aa12.51□□□□□ -0.41
SHMT1P1-201ENST00000419974 RP1L1Q8IWN7 2480 aaPredicted RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 H3BSA7 217 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 SRSF10O75494 262 aaKnown RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 MMP7P09237 267 aaPredicted RBP12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 HSMCR30P0CW71 290 aa12.5□□□□□ -0.41
SHMT1P1-201ENST00000419974 COX5BP10606 129 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms