RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 DNAJC13O75165 2243 aa8.04□□□□□ -1.12
LINCMD1-201ENST00000418518 ARHGAP21Q5T5U3 1957 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 A0A0B4J203 849 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 LOC107986453A0A1B0GWG9 222 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ZNF726A6NNF4 738 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 CDRT15L2A8MXV6 281 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ZNF878C9JN71 531 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 BOLA2-SMG1P6H3BVE0 249 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 SMAD9O15198 467 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 LYRM1O43325 122 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 SULT1B1O43704 296 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 NEURL1O76050 574 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 TNFSF15O95150 251 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 OPN1LWP04000 364 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 CD2P06729 351 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 TRAPPC2P0DI81 140 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 TRAPPC2BP0DI82 140 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 CTSSP25774 331 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 SOX2P48431 317 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 CSNK1A1P48729 337 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 GFRA1P56159 465 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 CLDN17P56750 224 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 SOX8P57073 446 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 PSMA6P60900 246 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 HIST1H3AP68431 136 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 PITPNAQ00169 270 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 HIST2H3PS2Q5TEC6 136 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 TMEM244Q5VVB8 128 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 AGAP6Q5VW22 663 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 OTPQ5XKR4 325 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 MZT2BQ6NZ67 158 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 DNM1P46Q6ZS02 220 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ESPNLQ6ZVH7 1005 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 HIST2H3AQ71DI3 136 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 GPAT4Q86UL3 456 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 DTX1Q86Y01 620 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 LINC00346Q8IVM7 164 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 UBQLNLQ8IYU4 475 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ELMOD2Q8IZ81 293 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 CMTM4Q8IZR5 234 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ZIC4Q8N9L1 334 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 C19orf18Q8NEA5 215 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ZNF671Q8TAW3 534 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 SMIM4Q8WVI0 70 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 TSEN15Q8WW01 171 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 YIPF5Q969M3 257 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 RFT1Q96AA3 541 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 PNPLA2Q96AD5 504 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 AGAP4Q96P64 663 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ABHD1Q96SE0 405 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 FAM173AQ9BQD7 235 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 C7orf50Q9BRJ6 194 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 SRXN1Q9BYN0 137 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ZNF703Q9H7S9 590 aaPredicted RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 PNRC2Q9NPJ4 139 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 DDX28Q9NUL7 540 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 GLTPQ9NZD2 209 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 ABI3Q9P2A4 366 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 OR5V1Q9UGF6 321 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 STEAP1Q9UHE8 339 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 NUFIP1Q9UHK0 495 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 OR52A1Q9UKL2 312 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 FBXL3Q9UKT7 428 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 HHLA2Q9UM44 414 aa8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 MRPS18BQ9Y676 258 aaKnown RBP8.03□□□□□ -1.12
LINCMD1-201ENST00000418518 EP300Q09472 2414 aaPredicted RBP8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 ZNF407Q9C0G0 2248 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 A0A1W2PPL8 197 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 LOC390937A0A1W2PQ73 354 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 PINLYPA6NC86 204 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 ANXA2P2A6NMY6 339 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 ZNF716A6NP11 495 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 PRR33A8MZF0 331 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 SLC17A2O00624 439 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 TNFSF11O14788 317 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 LANCL1O43813 399 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 HPNP05981 417 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 ANXA2P07355 339 aaKnown RBP8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 QDPRP09417 244 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 H2BFMP0C1H6 154 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 RFPL3SP0C7P2 107 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 PRKAR1AP10644 381 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 CCL1P22362 96 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 CD96P40200 585 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 CASRP41180 1078 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 RANBP1P43487 201 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 KIR2DL3P43628 341 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 CLDN20P56880 219 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 MRPS10P82664 201 aaKnown RBP8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 MFAP5Q13361 173 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 TOMM20Q15388 145 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 HES5Q5TA89 166 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 BCL2L15Q5TBC7 163 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 ABHD17BQ5VST6 288 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 CFAP77Q6ZQR2 320 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 SPATC1Q76KD6 591 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 LYPD6Q86Y78 171 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 C20orf196Q8IYI0 205 aa8.02□□□□□ -1.13
LINCMD1-201ENST00000418518 ZNF433Q8N7K0 673 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms