RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 PTGES3Q15185 160 aaKnown RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 ZNF544Q6NX49 715 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 PLBD1Q6P4A8 553 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 CORO6Q6QEF8 472 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 VASH1Q7L8A9 365 aaPredicted RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 SYT9Q86SS6 491 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 DTX2Q86UW9 622 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 FBXL14Q8N1E6 418 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 MUC15Q8N387 334 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 OR6K6Q8NGW6 343 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 PIGTQ969N2 578 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 MBD6Q96DN6 1003 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 RBM4BQ9BQ04 359 aaKnown RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 TRAF4Q9BUZ4 470 aaPredicted RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 GABARAPL3Q9BY60 117 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 HINT3Q9NQE9 182 aaKnown RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 BEX4Q9NWD9 120 aaPredicted RBP10.78□□□□□ -0.68
SKA1-203ENST00000417656 PLEK2Q9NYT0 353 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 TVP23BQ9NYZ1 205 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 ENOPH1Q9UHY7 261 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 COMMD3-BMI1R4GMX3 469 aa10.78□□□□□ -0.68
SKA1-203ENST00000417656 LOC100509620A0A075B734 347 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 ZAR1LA6NP61 321 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 PRR23D1E9PI22 279 aaPredicted RBP10.77□□□□□ -0.69
SKA1-203ENST00000417656 RER1O15258 196 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 SMPD2O60906 423 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 SNAP29O95721 258 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 PTHP01270 115 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 CD8AP01732 235 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 ALPLP05186 524 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 FAM157BP0CG42 384 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 PRR23D2P0DMB1 279 aaPredicted RBP10.77□□□□□ -0.69
SKA1-203ENST00000417656 NR4A1P22736 598 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 GGT2P36268 569 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 CDKN1AP38936 164 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 RPS27P42677 84 aaKnown RBP10.77□□□□□ -0.69
SKA1-203ENST00000417656 HTR5AP47898 357 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 GDI2P50395 445 aaKnown RBP10.77□□□□□ -0.69
SKA1-203ENST00000417656 ADAM8P78325 824 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 RAB35Q15286 201 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 RCN1Q15293 331 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 ADIPOQQ15848 244 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 MSMPQ1L6U9 139 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 CCDC92Q53HC0 331 aaPredicted RBP10.77□□□□□ -0.69
SKA1-203ENST00000417656 LINC01590Q5TEZ4 76 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 AGAP6Q5VW22 663 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 SLX4IPQ5VYV7 408 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 C11orf71Q6IPW1 123 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 CFAP77Q6ZQR2 320 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 CBR4Q8N4T8 237 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 BBS1Q8NFJ9 593 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 OR1J2Q8NGS2 313 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 POM121L2Q96KW2 1035 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 WACQ9BTA9 647 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 TEX12Q9BXU0 123 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 CXorf56Q9H5V9 222 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 ZNF442Q9H7R0 627 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 USE1Q9NZ43 259 aa10.77□□□□□ -0.69
SKA1-203ENST00000417656 CCDC168Q8NDH2 2452 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 C5orf49A4QMS7 147 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 OR6C6A6NF89 314 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 PRKYO43930 277 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 SPARCP09486 303 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 OR4A8P0C604 315 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 ZNF823P16415 610 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 FMO3P31513 532 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 APOBEC3AP31941 199 aaPredicted RBP10.76□□□□□ -0.69
SKA1-203ENST00000417656 POLR2IP36954 125 aaKnown RBP10.76□□□□□ -0.69
SKA1-203ENST00000417656 ALDH3A2P51648 485 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 ERVS71-1P61550 626 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 SNAPC1Q16533 368 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 C12orf73Q69YU5 71 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 SLC18B1Q6NT16 456 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 RFPL4BQ6ZWI9 263 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 CXXC5Q7LFL8 322 aaKnown RBP10.76□□□□□ -0.69
SKA1-203ENST00000417656 CPOQ8IVL8 374 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 ALDH16A1Q8IZ83 802 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 ZNF511Q8NB15 262 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 SLC7A6Q92536 515 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 PTP4A1Q93096 173 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 PERPQ96FX8 193 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 FOXC2Q99958 501 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 C9orf16Q9BUW7 83 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 PRRG3Q9BZD7 231 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 OR51V1Q9H2C8 321 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 WDR76Q9H967 626 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 CBLN4Q9NTU7 201 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 KCNG2Q9UJ96 466 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 GDF2Q9UK05 429 aaPredicted RBP10.76□□□□□ -0.69
SKA1-203ENST00000417656 NDRG4Q9ULP0 352 aaKnown RBP10.76□□□□□ -0.69
SKA1-203ENST00000417656 SPEF1Q9Y4P9 236 aa10.76□□□□□ -0.69
SKA1-203ENST00000417656 MYO9AB2RTY4 2548 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 SYNGR3O43761 229 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 GLCEO94923 617 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 COX5BP10606 129 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 SLC2A5P22732 501 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 GLRXP35754 106 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 SERPINF1P36955 418 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 WNT5AP41221 380 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms