RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 CIB1Q99828 191 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 SLC6A7Q99884 636 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 NIPSNAP1Q9BPW8 284 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 RBM4BQ9BQ04 359 aaKnown RBP11.02□□□□□ -0.65
LINC00339-202ENST00000416769 RBM4Q9BWF3 364 aaKnown RBP11.02□□□□□ -0.65
LINC00339-202ENST00000416769 G6PC2Q9NQR9 355 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 C8orf4Q9NR00 106 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 TAS2R5Q9NYW4 299 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 USE1Q9NZ43 259 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 DUSP13Q9UII6 198 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 SIGLEC7Q9Y286 467 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 HIF3AQ9Y2N7 669 aa11.02□□□□□ -0.65
LINC00339-202ENST00000416769 BLOC1S5-TXNDC5H3BN57 136 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 PLPP3O14495 311 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 OR6A2O95222 327 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 FAM157BP0CG42 384 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 ACHEP22303 614 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 ALDH3A2P51648 485 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 POU3F1Q03052 451 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-202ENST00000416769 FHL1Q13642 323 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 TAF11Q15544 211 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 TMEM255AQ5JRV8 349 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 OGFRL1Q5TC84 451 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-202ENST00000416769 RASSF6Q6ZTQ3 369 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 OR51A7Q8NH64 312 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 RDH5Q92781 318 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 SLC29A1Q99808 456 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 TMPRSS13Q9BYE2 586 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 RASSF4Q9H2L5 321 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 SMURF2Q9HAU4 748 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 IL20Q9NYY1 176 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 FBXO9Q9UK97 447 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-202ENST00000416769 PCDHB10Q9UN67 800 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 POFUT2Q9Y2G5 429 aa11.01□□□□□ -0.65
LINC00339-202ENST00000416769 A0A1W2PPW3 197 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 SOCS2O14508 198 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 PLPP2O43688 288 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 ADORA3P0DMS8 318 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 OSMP13725 252 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 GLRXP35754 106 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 CCL8P80075 99 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 GLO1Q04760 184 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 RFX4Q33E94 735 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 AWAT1Q58HT5 328 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 LPCAT4Q643R3 524 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 RPL13AP3Q6NVV1 102 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 NANOGNBQ7Z5D8 188 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 PXKQ7Z7A4 578 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 UEVLDQ8IX04 471 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 SKA3Q8IX90 412 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 CBR4Q8N4T8 237 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 PACRGLQ8N7B6 248 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 CLDN22Q8N7P3 220 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 ZDHHC22Q8N966 263 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 LRRC75AQ8NAA5 344 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 OR13C2Q8NGS9 318 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 FAM216AQ8WUB2 273 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 PAPOLBQ9NRJ5 636 aaKnown RBP11□□□□□ -0.65
LINC00339-202ENST00000416769 KIF17Q9P2E2 1029 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 GRIP1Q9Y3R0 1128 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 TGP01266 2768 aa11□□□□□ -0.65
LINC00339-202ENST00000416769 TRAV27A0A087WT01 109 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 A0A0A6YYJ9 748 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 VSTM5A8MXK1 200 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 EI24O14681 340 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 NDUFB2O95178 105 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 PNPP00491 289 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 ALPLP05186 524 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 ZNF26P17031 533 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-202ENST00000416769 AQP2P41181 271 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 RAB1AP62820 205 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 RPL18Q07020 188 aaKnown RBP10.99□□□□□ -0.65
LINC00339-202ENST00000416769 PUDPQ08623 228 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 SMARCD3Q6STE5 483 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 PARP8Q8N3A8 854 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 OR51F2Q8NH61 342 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-202ENST00000416769 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 FOXB1Q99853 325 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 ULBP2Q9BZM5 246 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 NDEL1Q9GZM8 345 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 OR52D1Q9H346 318 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 ZNF665Q9H7R5 613 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 KRT84Q9NSB2 600 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 TAAR3PQ9P1P4 343 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 ENOPH1Q9UHY7 261 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 PCDHGB1Q9Y5G3 927 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 NOX1Q9Y5S8 564 aa10.99□□□□□ -0.65
LINC00339-202ENST00000416769 C11orf98E9PRG8 122 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 RNF13O43567 381 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 MPZL1O95297 269 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 TFP02787 698 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 AHCYP23526 432 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 PAX7P23759 505 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 PEX2P28328 305 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 EVX1P49640 407 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 CRISP1P54107 249 aa10.98□□□□□ -0.65
LINC00339-202ENST00000416769 RAD23AP54725 363 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms