RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DOK2O60496 412 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 FSHBP01225 129 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 IGHV2-70P01814 119 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 PPIAL4FP0DN26 164 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 COX5BP10606 129 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 FUT4P22083 530 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 TUBG1P23258 451 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 HTR5AP47898 357 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 SLC9A3P48764 834 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 PRKCDQ05655 676 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 SF3A3Q12874 501 aaKnown RBP eCLIP12.19□□□□□ -0.46
PAF1-202ENST00000416728 CDK5R2Q13319 367 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 FHL1Q13642 323 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 ZNF730Q6ZMV8 503 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 VTCN1Q7Z7D3 282 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 KLHL36Q8N4N3 616 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 SGMS2Q8NHU3 365 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
PAF1-202ENST00000416728 NTN4Q9HB63 628 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 EMC7Q9NPA0 242 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 ESM1Q9NQ30 184 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 TUBG2Q9NRH3 451 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 DDX28Q9NUL7 540 aaKnown RBP12.19□□□□□ -0.46
PAF1-202ENST00000416728 ARGLU1Q9NWB6 273 aaPredicted RBP12.19□□□□□ -0.46
PAF1-202ENST00000416728 GRHPRQ9UBQ7 328 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
PAF1-202ENST00000416728 SNX13Q9Y5W8 968 aa12.19□□□□□ -0.46
PAF1-202ENST00000416728 XKRYO14609 159 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 SGCEO43556 437 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 ZNF682O95780 498 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 SCG5P05408 212 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 CD14P08571 375 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 TNFRSF1AP19438 455 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 ZFP36P26651 326 aaKnown RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 UBA52P62987 128 aaKnown RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 HNRNPA0Q13151 305 aaKnown RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 ARPINQ7Z6K5 226 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 RNF113BQ8IZP6 322 aaKnown RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 ZDHHC22Q8N966 263 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 OR2Z1Q8NG97 314 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 SAMD8Q96LT4 415 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 NDEL1Q9GZM8 345 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 FGFR1OP2Q9NVK5 253 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 AP3M1Q9Y2T2 418 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 ADAM18Q9Y3Q7 739 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 A0A087WUU8 490 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 FFAR1O14842 300 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 SURF4O15260 269 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 AHCYL1O43865 530 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 EGR1P18146 543 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 KITLGP21583 273 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 GPR4P46093 362 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 TMEM155Q4W5P6 130 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 IFI44LQ53G44 452 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 AWAT1Q58HT5 328 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 ARMCX4Q5H9R4 360 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 MBOAT2Q6ZWT7 520 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 FKBP9P1Q75LS8 142 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 RRM2BQ7LG56 351 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 ZNF283Q8N7M2 679 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 FAM156AQ8NDB6 213 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 DEFB108BQ8NET1 73 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 DVL3Q92997 716 aaPredicted RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 POP5Q969H6 163 aaKnown RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 RCN3Q96D15 328 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 CMBLQ96DG6 245 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 Q96M85 177 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 COG8Q96MW5 612 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 ZNF570Q96NI8 536 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 POFUT1Q9H488 388 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 PATZ1Q9HBE1 687 aaKnown RBP12.18□□□□□ -0.46
PAF1-202ENST00000416728 CMTM6Q9NX76 183 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 PLEK2Q9NYT0 353 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 EGFL7Q9UHF1 273 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 PPP1R3CQ9UQK1 317 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 PPIAL4AQ9Y536 164 aa12.18□□□□□ -0.46
PAF1-202ENST00000416728 TEX13CA0A0J9YWL9 993 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 PRSS37A4D1T9 235 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 CDC42EP2O14613 210 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 BTG1P62324 171 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 AQP6Q13520 282 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 ZBED5Q49AG3 693 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 MESTQ5EB52 335 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 C1orf94Q6P1W5 598 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 TBPL2Q6SJ96 375 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 Q6ZR03 302 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 ITLN1Q8WWA0 313 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 MMP26Q9NRE1 261 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 GMPR2Q9P2T1 348 aaKnown RBP12.17□□□□□ -0.46
PAF1-202ENST00000416728 IL19Q9UHD0 177 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 POLR3KQ9Y2Y1 108 aaPredicted RBP12.17□□□□□ -0.46
PAF1-202ENST00000416728 AUP1Q9Y679 476 aa12.17□□□□□ -0.46
PAF1-202ENST00000416728 CXCR6O00574 342 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 GSTA4O15217 222 aa12.16□□□□□ -0.46
PAF1-202ENST00000416728 SLC22A2O15244 555 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms