RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 MEPEQ9NQ76 525 aaPredicted RBP8.42□□□□□ -1.06
MDC1-202ENST00000416571 TNFRSF19Q9NS68 423 aa8.42□□□□□ -1.06
MDC1-202ENST00000416571 IGKV1D-43A0A0B4J1Z2 117 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 NPIPB13A6NJU9 1138 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 C12orf71A8MTZ7 269 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 SRRM5B3KS81 715 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 NPIPB4C9JG80 1138 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 TMEM178BH3BS89 294 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 IFNL4K9M1U5 179 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PLATP00750 562 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 WNT2P09544 360 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 TUBG1P23258 451 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 RBM34P42696 430 aaKnown RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 SRSF4Q08170 494 aaKnown RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 RUNDC3AQ59EK9 446 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 ALG10Q5BKT4 473 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 INTS11Q5TA45 600 aaKnown RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 GPR157Q5UAW9 335 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 FAM205BPQ63HN1 556 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 OLFML2AQ68BL7 652 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 SLC25A47Q6Q0C1 308 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 FIP1L1Q6UN15 594 aaKnown RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 NLRC3Q7RTR2 1065 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 DHDDSQ86SQ9 333 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PTOV1Q86YD1 416 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 ATG16L2Q8NAA4 619 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 OR4D11Q8NGI4 311 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 MOSPD2Q8NHP6 518 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PFN4Q8NHR9 129 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 RAB40AQ8WXH6 277 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 COG8Q96MW5 612 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 OR2V2Q96R30 315 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 SIGLEC11Q96RL6 698 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PKP2Q99959 881 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PRSS27Q9BQR3 290 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 SLC30A2Q9BRI3 323 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 ALG12Q9BV10 488 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PCDHAC1Q9H158 963 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 TXNIPQ9H3M7 391 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 TUBG2Q9NRH3 451 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 TBCCD1Q9NVR7 557 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PDP1Q9P0J1 537 aaPredicted RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 KIF17Q9P2E2 1029 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 MIOXQ9UGB7 285 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.41□□□□□ -1.06
MDC1-202ENST00000416571 SH3GLB1Q9Y371 365 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 MED31Q9Y3C7 131 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 SOX21Q9Y651 276 aaPredicted RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 V9GYY5 206 aaPredicted RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 VWFP04275 2813 aa8.41□□□□□ -1.06
MDC1-202ENST00000416571 PRKDCP78527 4128 aaKnown RBP8.41□□□□□ -1.06
MDC1-202ENST00000416571 LRRC30A6NM36 301 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 ANGPT2O15123 496 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 DOK2O60496 412 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 COX5BP10606 129 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 KITLGP21583 273 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 MSR1P21757 451 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 HTR5AP47898 357 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 MMP16P51512 607 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 SLC18A1P54219 525 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 MTPNP58546 118 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 GUCY1A3Q02108 690 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 SCRN3Q0VDG4 424 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 LAPTM4AQ15012 233 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 PDCD1Q15116 288 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 DEFB112Q30KQ8 113 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 SLC27A4Q6P1M0 643 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 C1orf94Q6P1W5 598 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 DLEU7Q6UYE1 221 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 BRD3OSQ6XYD6 125 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 Q6ZR03 302 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 TSPYL5Q86VY4 417 aaPredicted RBP8.4□□□□□ -1.06
MDC1-202ENST00000416571 KLBQ86Z14 1044 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 NKAIN4Q8IVV8 208 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 POU5F2Q8N7G0 328 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 OR8B3Q8NGG8 313 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 OR10S1Q8NGN2 331 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 TMEM255BQ8WV15 326 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 TMEM239Q8WW34 195 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 NMD3Q96D46 503 aaKnown RBP8.4□□□□□ -1.06
MDC1-202ENST00000416571 CMBLQ96DG6 245 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 NEIL1Q96FI4 390 aaPredicted RBP8.4□□□□□ -1.06
MDC1-202ENST00000416571 OR8B2Q96RD0 313 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 CCDC28BQ9BUN5 200 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 RABEP2Q9H5N1 569 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 MARCH7Q9H992 704 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 GCM1Q9NP62 436 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 C20orf141Q9NUB4 165 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 CLN8Q9UBY8 286 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 NDUFAF1Q9Y375 327 aa8.4□□□□□ -1.06
MDC1-202ENST00000416571 DOCK11Q5JSL3 2073 aa8.39□□□□□ -1.07
MDC1-202ENST00000416571 CLPSL1A2RUU4 121 aa8.39□□□□□ -1.07
MDC1-202ENST00000416571 SGCEO43556 437 aa8.39□□□□□ -1.07
MDC1-202ENST00000416571 ZNF205O95201 554 aa8.39□□□□□ -1.07
MDC1-202ENST00000416571 IGF2P01344 180 aa8.39□□□□□ -1.07
MDC1-202ENST00000416571 SRP9P49458 86 aaKnown RBP8.39□□□□□ -1.07
MDC1-202ENST00000416571 IDH3AP50213 366 aa8.39□□□□□ -1.07
MDC1-202ENST00000416571 BPIFB3P59826 476 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms