RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CD47Q08722 323 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 LAPTM4AQ15012 233 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 CCDC80Q76M96 950 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 DPP10Q8N608 796 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 NPEPL1Q8NDH3 523 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 OR2Z1Q8NG97 314 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 RBP7Q96R05 134 aa12.91□□□□□ -0.34
DDX56-202ENST00000415758 POLR2J2Q9GZM3 115 aaKnown RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 POLR2J3Q9H1A7 115 aaKnown RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 KAT8Q9H7Z6 458 aaKnown RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX56-202ENST00000415758 NDRG4Q9ULP0 352 aaKnown RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 SOX21Q9Y651 276 aaPredicted RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 V9GYY5 206 aaPredicted RBP12.91□□□□□ -0.34
DDX56-202ENST00000415758 CEACAM18A8MTB9 384 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 IFNL4K9M1U5 179 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 SURF4O15260 269 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 FSTL3O95633 263 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 PCGF2P35227 344 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 GUCA1AP43080 201 aaPredicted RBP12.9□□□□□ -0.34
DDX56-202ENST00000415758 MTPNP58546 118 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
DDX56-202ENST00000415758 SELPLGQ14242 412 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 ENDOGQ14249 297 aaKnown RBP12.9□□□□□ -0.34
DDX56-202ENST00000415758 INTS11Q5TA45 600 aaKnown RBP12.9□□□□□ -0.34
DDX56-202ENST00000415758 BTNL3Q6UXE8 466 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 SPATC1Q76KD6 591 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 DHDDSQ86SQ9 333 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 SLC26A7Q8TE54 656 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 TMEM255BQ8WV15 326 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 TMEM239Q8WW34 195 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 ITLN1Q8WWA0 313 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 WFDC12Q8WWY7 111 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 RAB40AQ8WXH6 277 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 TLCD1Q96CP7 247 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 HAVCR1Q96D42 359 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 CGREF1Q99674 301 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 SSBP3Q9BWW4 388 aaPredicted RBP12.9□□□□□ -0.34
DDX56-202ENST00000415758 GCM1Q9NP62 436 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 ARMCX1Q9P291 453 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 HIF3AQ9Y2N7 669 aa12.9□□□□□ -0.34
DDX56-202ENST00000415758 IGHV2-70DA0A0C4DH43 119 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 C12orf71A8MTZ7 269 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 OR5F1O95221 314 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 ABHD16AO95870 558 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 GPANK1O95872 356 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 MSR1P21757 451 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 OMGP23515 440 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 GZMMP51124 257 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 RPL27P61353 136 aaKnown RBP12.89□□□□□ -0.35
DDX56-202ENST00000415758 ALG10Q5BKT4 473 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 POU5F2Q8N7G0 328 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 CMBLQ96DG6 245 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 COG8Q96MW5 612 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 CITED1Q99966 193 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 POFUT1Q9H488 388 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 RABEP2Q9H5N1 569 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 BEX1Q9HBH7 125 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 TMEM165Q9HC07 324 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 PDP1Q9P0J1 537 aaPredicted RBP12.89□□□□□ -0.35
DDX56-202ENST00000415758 RIMS3Q9UJD0 308 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 NDUFAF1Q9Y375 327 aa12.89□□□□□ -0.35
DDX56-202ENST00000415758 IGHV3OR16-10A0A075B7F0 116 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 HOXA3O43365 443 aaPredicted RBP12.88□□□□□ -0.35
DDX56-202ENST00000415758 KNG1P01042 644 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 THRBP10828 461 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 MMP16P51512 607 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 BPIFB3P59826 476 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
DDX56-202ENST00000415758 VMACQ2NL98 169 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 JAZF1Q86VZ6 243 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 CLDN22Q8N7P3 220 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 OR4F5Q8NH21 305 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 PTP4A1Q93096 173 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 OR2V2Q96R30 315 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 MIOXQ9UGB7 285 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 STARD10Q9Y365 291 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 SH3GLB1Q9Y371 365 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 MED31Q9Y3C7 131 aa12.88□□□□□ -0.35
DDX56-202ENST00000415758 TRAV40A0A0B4J280 105 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 FAM181BA6NEQ2 426 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 NDUFA7O95182 113 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 SCG5P05408 212 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 TAS2R41P59536 307 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 SRSF4Q08170 494 aaKnown RBP12.87□□□□□ -0.35
DDX56-202ENST00000415758 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 SLC27A4Q6P1M0 643 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 Q6YL49 198 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 C17orf107Q6ZR85 190 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 KLBQ86Z14 1044 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 KIR3DL3Q8N743 410 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 LRRC75AQ8NAA5 344 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 OR10S1Q8NGN2 331 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 OR10A6Q8NH74 314 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 TSPEARQ8WU66 669 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms