RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PTCHD4Q6ZW05 846 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 OR2T29Q8NH02 315 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 OR4K13Q8NH42 304 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 CLPTM1LQ96KA5 538 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 C4orf45Q96LM5 186 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 BPESC1Q9GZL8 116 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 SRA1Q9HD15 236 aaKnown RBP9.61□□□□□ -0.87
RFFL-204ENST00000414419 HINT3Q9NQE9 182 aaKnown RBP9.61□□□□□ -0.87
RFFL-204ENST00000414419 PLEK2Q9NYT0 353 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 SAMHD1Q9Y3Z3 626 aaKnown RBP9.61□□□□□ -0.87
RFFL-204ENST00000414419 U3KQV3 271 aa9.61□□□□□ -0.87
RFFL-204ENST00000414419 IGLV3-9A0A075B6K5 115 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 A0A096LNT2 108 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 PLSCR5A0PG75 271 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 C17orf100A8MU93 164 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 VWC2LB2RUY7 222 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 GNGT2O14610 69 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 TPD52L2O43399 206 aaKnown RBP9.6□□□□□ -0.87
RFFL-204ENST00000414419 UBOX5O94941 541 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 MPZL1O95297 269 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 ABHD16AO95870 558 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 HLA-DQA2P01906 255 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 RAP2AP10114 183 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 COX5BP10606 129 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 HIST1H1CP16403 213 aaKnown RBP9.6□□□□□ -0.87
RFFL-204ENST00000414419 GIFP27352 417 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 GZMKP49863 264 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 PPP1CBP62140 327 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 GLO1Q04760 184 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 PPP1R8Q12972 351 aaKnown RBP9.6□□□□□ -0.87
RFFL-204ENST00000414419 PCGF3Q3KNV8 242 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 KRTAP21-3Q3LHN1 58 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 CLEC12AQ5QGZ9 265 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 SPATA46Q5T0L3 261 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.6□□□□□ -0.87
RFFL-204ENST00000414419 ZNF101Q8IZC7 436 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 OR9Q2Q8NGE9 314 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 SLC25A40Q8TBP6 338 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 RDH5Q92781 318 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 SNX18Q96RF0 628 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 CDADC1Q9BWV3 514 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 OR2J1Q9GZK6 312 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 RPRD1BQ9NQG5 326 aaKnown RBP9.6□□□□□ -0.87
RFFL-204ENST00000414419 DECR2Q9NUI1 292 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 ASH2LQ9UBL3 628 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 B9D1Q9UPM9 204 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 GRIP1Q9Y3R0 1128 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 CDH10Q9Y6N8 788 aa9.6□□□□□ -0.87
RFFL-204ENST00000414419 JMJD1CQ15652 2540 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.59□□□□□ -0.876e-8■■□□□ 12.2
RFFL-204ENST00000414419 ABCA2Q9BZC7 2435 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 AQP12BA6NM10 295 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 LYNX1G3V0Z9 82 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 CST1P01037 141 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 GASTP01350 101 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 IGHV3-13P01766 116 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 HPXP02790 462 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 IGFBP1P08833 259 aaPredicted RBP9.59□□□□□ -0.87
RFFL-204ENST00000414419 LYNX1P0DP58 116 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 ZNF23P17027 643 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 HOXB6P17509 224 aaKnown RBP9.59□□□□□ -0.87
RFFL-204ENST00000414419 GSTM3P21266 225 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 ACHEP22303 614 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 LIPAP38571 399 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 WNT5AP41221 380 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 CHN2P52757 468 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 CCL8P80075 99 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 TEKQ02763 1124 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.87
RFFL-204ENST00000414419 GK3PQ14409 553 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 KCNMB1Q16558 191 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 MICAQ29983 383 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 SLC36A3Q495N2 470 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 SLC35F1Q5T1Q4 408 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 C6orf52Q5T4I8 152 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 MBNL2Q5VZF2 373 aaKnown RBP9.59□□□□□ -0.87
RFFL-204ENST00000414419 OTPQ5XKR4 325 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 RASSF6Q6ZTQ3 369 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 VASH1Q7L8A9 365 aaPredicted RBP9.59□□□□□ -0.87
RFFL-204ENST00000414419 AQP12AQ8IXF9 295 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 OR6V1Q8N148 313 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 AQP11Q8NBQ7 271 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 SDR9C7Q8NEX9 313 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 GJC3Q8NFK1 279 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 OR52E2Q8NGJ4 325 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 OR4C15Q8NGM1 316 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 OR2AJ1Q8NGZ0 328 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 KLF14Q8TD94 323 aaPredicted RBP9.59□□□□□ -0.87
RFFL-204ENST00000414419 MARS2Q96GW9 593 aaKnown RBP9.59□□□□□ -0.87
RFFL-204ENST00000414419 COG8Q96MW5 612 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 TSSK2Q96PF2 358 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 BTBD10Q9BSF8 475 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 EGLN3Q9H6Z9 239 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 CHODLQ9H9P2 273 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 CYSLTR2Q9NS75 346 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 TBC1D23Q9NUY8 699 aa9.59□□□□□ -0.87
RFFL-204ENST00000414419 IGHV4-61A0A0C4DH41 118 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms