RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 NXF5Q9H1B4 397 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 PURGQ9UJV8 347 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 OR6A2O95222 327 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 CBR1P16152 277 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 ADAM8P78325 824 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 FMODQ06828 376 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC17A1Q14916 467 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 TMEM151BQ8IW70 566 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 WDR92Q96MX6 357 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 USB1Q9BQ65 265 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 SEMA6CQ9H3T2 930 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 OR2S2Q9NQN1 319 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 SULT2B1O00204 365 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 CEP290O15078 2479 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 BCL2L11O43521 198 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 PMS2P2O95744 297 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 PMP2P02689 132 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 GNB3P16520 340 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 ID4P47928 161 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 TAS2R19P59542 299 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 TMEM184AQ6ZMB5 413 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 EIF4E3Q8N5X7 224 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 OTOSQ8NHW6 89 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 MMABQ96EY8 250 aaPredicted RBP13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 OR8D2Q9GZM6 311 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 PRTFDC1Q9NRG1 225 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 TAS2R8Q9NYW2 309 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 EPHA6Q9UF33 1036 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF175Q9Y473 711 aa13.11□□□□□ -0.31
SEMA3F-202ENST00000413852 EFCAB7A8K855 629 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 HCRTR2O43614 444 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 SIGLEC6O43699 453 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 KIR2DL1P43626 348 aaPredicted RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 GPR3P46089 330 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 ZP2Q05996 745 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 NFATC4Q14934 902 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 KLHL26Q53HC5 615 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 EEF1A1P5Q5VTE0 462 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 PTCRAQ6ISU1 281 aaPredicted RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 FJX1Q86VR8 437 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 OR10R2Q8NGX6 335 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 RRNAD1Q96FB5 475 aaKnown RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 FN3KRPQ9HA64 309 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 C2orf16Q68DN1 1984 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 FREM2Q5SZK8 3169 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 RP1P56715 2156 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 F8W036 122 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 P2RY10O00398 339 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 FARS2O95363 451 aaKnown RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 RENP00797 406 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 CD96P40200 585 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC25A1P53007 311 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 BLOC1S1P78537 153 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 INSM1Q01101 510 aaPredicted RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 FOXRED2Q8IWF2 684 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 PARP12Q9H0J9 701 aaKnown RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 DNTTIP1Q9H147 329 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC6A15Q9H2J7 730 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 C1orf198Q9H425 327 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 TREM1Q9NP99 234 aa13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 GPN3Q9UHW5 284 aaPredicted RBP13.1□□□□□ -0.31
SEMA3F-202ENST00000413852 FRYLO94915 3013 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 TMEM218A2RU14 115 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 MSGN1A6NI15 193 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 C2orf74A8MZ97 194 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 H7C2Y5 167 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 KLF8O95600 359 aaPredicted RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 HRH1P35367 487 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 IL13RA1P78552 427 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 FGL1Q08830 312 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 SKP2Q13309 424 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 ACKR1Q16570 336 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 WBP2NLQ6ICG8 309 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 TRAPPC6BQ86SZ2 158 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 FOXQ1Q9C009 403 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 GAREM1Q9H706 876 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC22A11Q9NSA0 550 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 LRP12Q9Y561 859 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 NUP210LQ5VU65 1888 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 A0A1W2PQF6 199 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF705EA8MWA4 302 aaPredicted RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 ICOSLGO75144 302 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 ADAP1O75689 374 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 RBM39Q14498 530 aaKnown RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 HFEQ30201 348 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 PAPD4Q6PIY7 484 aaKnown RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 C16orf47Q6ZP98 133 aaPredicted RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 Q6ZSR6 202 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 OR13H1Q8NG92 308 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 OR13C3Q8NGS6 347 aa13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 SCARF2Q96GP6 870 aaPredicted RBP13.09□□□□□ -0.31
SEMA3F-202ENST00000413852 OR8B4Q96RC9 309 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms