RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GGTLC2Q14390 218 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 MEP1BQ16820 701 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 NKPD1Q17RQ9 610 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 MICAQ29983 383 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 SPATA46Q5T0L3 261 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 PGM2L1Q6PCE3 622 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.69□□□□□ -0.38
LIMS4-201ENST00000413601 ADGRG5Q8IZF4 528 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 AQP11Q8NBQ7 271 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 SDR9C7Q8NEX9 313 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 UBASH3BQ8TF42 649 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 CANT1Q8WVQ1 401 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 WACQ9BTA9 647 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 CHID1Q9BWS9 393 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 PLA2G12AQ9BZM1 189 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 FN3KQ9H479 309 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 RPRD1BQ9NQG5 326 aaKnown RBP12.69□□□□□ -0.38
LIMS4-201ENST00000413601 ASH2LQ9UBL3 628 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 B9D1Q9UPM9 204 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 CDH10Q9Y6N8 788 aa12.69□□□□□ -0.38
LIMS4-201ENST00000413601 NSD1Q96L73 2696 aaPredicted RBP12.69□□□□□ -0.38
LIMS4-201ENST00000413601 FN1P02751 2386 aaKnown RBP12.69□□□□□ -0.38
LIMS4-201ENST00000413601 IGLV1-36A0A0B4J1U3 117 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 OR6C68A6NDL8 312 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 AQP12BA6NM10 295 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 CD5LO43866 347 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 DNAJC8O75937 253 aaPredicted RBP12.68□□□□□ -0.38
LIMS4-201ENST00000413601 CST1P01037 141 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 HTR5AP47898 357 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 PPP2R2BQ00005 443 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.68□□□□□ -0.38
LIMS4-201ENST00000413601 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 TMEM249Q2WGJ8 235 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 DNM1P34Q6PK57 102 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 RFPL4BQ6ZWI9 263 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 VASH1Q7L8A9 365 aaPredicted RBP12.68□□□□□ -0.38
LIMS4-201ENST00000413601 AQP12AQ8IXF9 295 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 ZNF786Q8N393 782 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 OR52L1Q8NGH7 329 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 OR52E2Q8NGJ4 325 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 OR8D4Q8NGM9 314 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 ABHD4Q8TB40 342 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 SLC25A40Q8TBP6 338 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 MARS2Q96GW9 593 aaKnown RBP12.68□□□□□ -0.38
LIMS4-201ENST00000413601 C4orf45Q96LM5 186 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 SNX18Q96RF0 628 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 OR2J1Q9GZK6 312 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 IL20Q9NYY1 176 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 ZFHX3Q15911 3703 aa12.68□□□□□ -0.38
LIMS4-201ENST00000413601 NIPBLQ6KC79 2804 aaeCLIP12.68□□□□□ -0.38
LIMS4-201ENST00000413601 DHRS12A0PJE2 317 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 BHLHE40O14503 412 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 RER1O15258 196 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 IGHV3-13P01766 116 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 HPXP02790 462 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 GAAP10253 952 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 COX5BP10606 129 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 GIFP27352 417 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 MPV17P39210 176 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 PPP1CBP62140 327 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 GLO1Q04760 184 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 BNIP1Q12981 228 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 FLOT2Q14254 428 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 ZNF718Q3SXZ3 478 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 CCDC92Q53HC0 331 aaPredicted RBP12.67□□□□□ -0.38
LIMS4-201ENST00000413601 TMEM255AQ5JRV8 349 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 UNQ6126/PRO20091Q6UXV3 157 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 ZBTB46Q86UZ6 589 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 NPEPL1Q8NDH3 523 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 KLF14Q8TD94 323 aaPredicted RBP12.67□□□□□ -0.38
LIMS4-201ENST00000413601 SLC7A6Q92536 515 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 GTF3AQ92664 365 aaKnown RBP12.67□□□□□ -0.38
LIMS4-201ENST00000413601 BPESC1Q9GZL8 116 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 ELOVL3Q9HB03 270 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 HINT3Q9NQE9 182 aaKnown RBP12.67□□□□□ -0.38
LIMS4-201ENST00000413601 YAE1D1Q9NRH1 226 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 TBC1D23Q9NUY8 699 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 SLCO1C1Q9NYB5 712 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 GPR160Q9UJ42 338 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 NDRG4Q9ULP0 352 aaKnown RBP12.67□□□□□ -0.38
LIMS4-201ENST00000413601 POLR1DQ9Y2S0 133 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 HIVEP2P31629 2446 aa12.67□□□□□ -0.38
LIMS4-201ENST00000413601 MALRD1Q5VYJ5 2156 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 C17orf100A8MU93 164 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 GSC2O15499 205 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 ICMTO60725 284 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 NCR1O76036 304 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 SOX14O95416 240 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 ABHD16AO95870 558 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 GSTM3P21266 225 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 COL8A2P25067 703 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 GCH1P30793 250 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 MAGEB1P43366 347 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 ERFP50548 548 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 ARHGDIAP52565 204 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms