RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 CCL19Q99731 98 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 DHRS9Q9BPW9 319 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 WACQ9BTA9 647 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 OR51V1Q9H2C8 321 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 C1orf198Q9H425 327 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 WDR76Q9H967 626 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 CHD3Q12873 2000 aaKnown RBP12.06□□□□□ -0.48
CPNE1-206ENST00000412056 POLQO75417 2590 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
CPNE1-206ENST00000412056 LOC100509620A0A075B734 347 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 GPRIN2O60269 458 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 GLCEO94923 617 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 SOD3P08294 240 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 NR4A1P22736 598 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 DNASE1P24855 282 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 FMO3P31513 532 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 GGT2P36268 569 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 HTR5AP47898 357 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 RAD23AP54725 363 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 ADAM8P78325 824 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 VASH1Q7L8A9 365 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-206ENST00000412056 ALDH16A1Q8IZ83 802 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 TCEANCQ8N8B7 351 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 NUP37Q8NFH4 326 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 OR1J2Q8NGS2 313 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 IGFBPL1Q8WX77 278 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 MBOAT4Q96T53 435 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 PRRG3Q9BZD7 231 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 OR51B6Q9H340 312 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 CA10Q9NS85 328 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 PLEK2Q9NYT0 353 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 LAMP3Q9UQV4 416 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 ORC6Q9Y5N6 252 aa12.05□□□□□ -0.48
CPNE1-206ENST00000412056 ARID1AO14497 2285 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 C5orf49A4QMS7 147 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 CCDC182A6NF36 153 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 SYNGR3O43761 229 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 SNAP29O95721 258 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 FAM157BP0CG42 384 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 COX5BP10606 129 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 ZNF823P16415 610 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 CCNOP22674 350 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 SLC2A5P22732 501 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 PEX2P28328 305 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 TTKP33981 857 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 THBS4P35443 961 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 ENTPD1P49961 510 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 GDI2P50395 445 aaKnown RBP12.04□□□□□ -0.48
CPNE1-206ENST00000412056 FABP6P51161 128 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 GALK2Q01415 458 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 RAB35Q15286 201 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 TRIP10Q15642 601 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 MSMPQ1L6U9 139 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 LRRC36Q1X8D7 754 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 KLHL12Q53G59 568 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 HIST2H3PS2Q5TEC6 136 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 LPCAT4Q643R3 524 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 ZNF544Q6NX49 715 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 TMEM154Q6P9G4 183 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 HIST2H3AQ71DI3 136 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 BCDIN3DQ7Z5W3 292 aaKnown RBP12.04□□□□□ -0.48
CPNE1-206ENST00000412056 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 OR2AJ1Q8NGZ0 328 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 SLC7A6Q92536 515 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 NINJ1Q92982 152 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 ZMYND19Q96E35 227 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-206ENST00000412056 IL4I1Q96RQ9 567 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 TRAF4Q9BUZ4 470 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-206ENST00000412056 GRIP2Q9C0E4 1043 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 TOR3AQ9H497 397 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 CYB5R1Q9UHQ9 305 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 KCNG2Q9UJ96 466 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 GDF2Q9UK05 429 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-206ENST00000412056 EDARQ9UNE0 448 aa12.04□□□□□ -0.48
CPNE1-206ENST00000412056 OR6C6A6NF89 314 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 E9PQ18 207 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 PRODHO43272 600 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 TLX2O43763 284 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-206ENST00000412056 CD8AP01732 235 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 SPARCP09486 303 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 GSTT1P30711 240 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 APOBEC3AP31941 199 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-206ENST00000412056 WNT5AP41221 380 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 BLVRAP53004 296 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 ERVS71-1P61550 626 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 RPS7P62081 194 aaKnown RBP12.03□□□□□ -0.48
CPNE1-206ENST00000412056 EFNB1P98172 346 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 APOFQ13790 326 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 ELFN2Q5R3F8 820 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 C11orf71Q6IPW1 123 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 ERI1Q8IV48 349 aaKnown RBP12.03□□□□□ -0.48
CPNE1-206ENST00000412056 FBXL14Q8N1E6 418 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 MUC15Q8N387 334 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 GJC3Q8NFK1 279 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 OR10S1Q8NGN2 331 aa12.03□□□□□ -0.48
CPNE1-206ENST00000412056 OR6N2Q8NGY6 317 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms