RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 OR5F1O95221 314 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ABHD16AO95870 558 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IGHV4-38-2P0DP08 117 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MDKP21741 143 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MDH2P40926 338 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MTNR1AP48039 350 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 GZMMP51124 257 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 RPL27P61353 136 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ENDOGQ14249 297 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 Q6ZR03 302 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 FNDC8Q8TC99 324 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CMBLQ96DG6 245 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 THOC1Q96FV9 657 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SIGLEC11Q96RL6 698 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 POLR2J2Q9GZM3 115 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 POLR2J3Q9H1A7 115 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 BAG5Q9UL15 447 aa11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB2-229ENST00000411527 C12orf71A8MTZ7 269 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SURF4O15260 269 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PIP5K1CO60331 668 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 WNT2P09544 360 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 KITLGP21583 273 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MSR1P21757 451 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TUBG1P23258 451 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OMGP23515 440 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR1E2P47887 323 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CTXN1P60606 82 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 FOXL2NBQ6ZUU3 175 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SYT9Q86SS6 491 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IGFN1Q86VF2 1251 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MUC20Q8N307 709 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PARP8Q8N3A8 854 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NPEPL1Q8NDH3 523 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TMIGD2Q96BF3 282 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR2V2Q96R30 315 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TUBG2Q9NRH3 451 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TBCCD1Q9NVR7 557 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IL20RAQ9UHF4 553 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 LRCH1Q9Y2L9 728 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 HIF3AQ9Y2N7 669 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 STARD10Q9Y365 291 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TGP01266 2768 aa11.96□□□□□ -0.49
HLA-DQB2-229ENST00000411527 DOCK11Q5JSL3 2073 aa11.96□□□□□ -0.5
HLA-DQB2-229ENST00000411527 CEACAM18A8MTB9 384 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 TMEM178BH3BS89 294 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 SCG5P05408 212 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 COX5BP10606 129 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 THRBP10828 461 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 IFI30P13284 250 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 NANOGP8Q6NSW7 305 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 C16orf87Q6PH81 154 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 BTNL3Q6UXE8 466 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 LRRN1Q6UXK5 716 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 C9orf139Q6ZV77 190 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 HAVCR1Q96D42 359 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 BPIFA2Q96DR5 249 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 SSBP3Q9BWW4 388 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 GCM1Q9NP62 436 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 EMC7Q9NPA0 242 aa11.95□□□□□ -0.5
HLA-DQB2-229ENST00000411527 MDFIC2A0A1B0GVS7 189 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 A6NIZ1 184 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 ZNF205O95201 554 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 PPIAL4GP0DN37 164 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 HTR5AP47898 357 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 RAP1BP61224 184 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 RAP1AP62834 184 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 PAX2Q02962 417 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 FAM205BPQ63HN1 556 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 C1orf94Q6P1W5 598 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 MICU2Q8IYU8 434 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 ATG16L2Q8NAA4 619 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 LRRC75AQ8NAA5 344 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 OR51A7Q8NH64 312 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 TSPEARQ8WU66 669 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 RAB40AQ8WXH6 277 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 PTP4A1Q93096 173 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 UPRTQ96BW1 309 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 TMEM165Q9HC07 324 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
HLA-DQB2-229ENST00000411527 TRAV40A0A0B4J280 105 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 IGHV2-70DA0A0C4DH43 119 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 H7C1C5 153 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 HOXA3O43365 443 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 SGCEO43556 437 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 DOK2O60496 412 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 PLATP00750 562 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 ERFP50548 548 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 MMP16P51512 607 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 LCN6P62502 163 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 GNB2P62879 340 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 GUCY1A3Q02108 690 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 SRSF4Q08170 494 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 SCRN3Q0VDG4 424 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 ST3GAL3Q11203 375 aa11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 CYLC2Q14093 348 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB2-229ENST00000411527 RABL3Q5HYI8 236 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms