RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 NPEPL1Q8NDH3 523 aa14.06□□□□□ -0.16
MRPL55-220ENST00000411464 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
MRPL55-220ENST00000411464 TBCCD1Q9NVR7 557 aa14.06□□□□□ -0.16
MRPL55-220ENST00000411464 IL19Q9UHD0 177 aa14.06□□□□□ -0.16
MRPL55-220ENST00000411464 SHOX2O60902 331 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-220ENST00000411464 THRBP10828 461 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 TNFRSF1BP20333 461 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 MSR1P21757 451 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 CD80P33681 288 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 PAX8Q06710 450 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 MIDNQ504T8 468 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 FAM205BPQ63HN1 556 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 LEG1Q6P5S2 330 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 BTNL3Q6UXE8 466 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 MUC20Q8N307 709 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-220ENST00000411464 CLDN22Q8N7P3 220 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 TSPEARQ8WU66 669 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 ITLN1Q8WWA0 313 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 CMBLQ96DG6 245 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 IL20RAQ9UHF4 553 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 HIF3AQ9Y2N7 669 aa14.05□□□□□ -0.16
MRPL55-220ENST00000411464 HTR3EA5X5Y0 456 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 A6NIZ1 184 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 F5H0A9 414 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-220ENST00000411464 GPANK1O95872 356 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 IFNA14P01570 189 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 COX5BP10606 129 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 KITLGP21583 273 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 OR1E2P47887 323 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 CTXN1P60606 82 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 RAP1BP61224 184 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 RAP1AP62834 184 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 ENDOGQ14249 297 aaKnown RBP14.04□□□□□ -0.16
MRPL55-220ENST00000411464 C16orf87Q6PH81 154 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 LRRN1Q6UXK5 716 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 Q6ZR03 302 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 FOXL2NBQ6ZUU3 175 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 HDXQ7Z353 690 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 PARP8Q8N3A8 854 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 HAVCR1Q96D42 359 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 BPIFA2Q96DR5 249 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 THOC1Q96FV9 657 aaKnown RBP14.04□□□□□ -0.16
MRPL55-220ENST00000411464 WACQ9BTA9 647 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 LRCH1Q9Y2L9 728 aa14.04□□□□□ -0.16
MRPL55-220ENST00000411464 IGHV3OR16-10A0A075B7F0 116 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 CEACAM18A8MTB9 384 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 TMEM178BH3BS89 294 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 IFNL4K9M1U5 179 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 WNT2P09544 360 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 PPIAL4GP0DN37 164 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 IGHV4-38-2P0DP08 117 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 IFI30P13284 250 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 MDKP21741 143 aaPredicted RBP14.03□□□□□ -0.16
MRPL55-220ENST00000411464 CPT2P23786 658 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 IFNA8P32881 189 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 HTR5AP47898 357 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 GZMMP51124 257 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 SCRN3Q0VDG4 424 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 CYLC2Q14093 348 aaPredicted RBP14.03□□□□□ -0.16
MRPL55-220ENST00000411464 C9orf139Q6ZV77 190 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 IGFN1Q86VF2 1251 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 ATG16L2Q8NAA4 619 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 DYDC1Q8WWB3 177 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 TAF15Q92804 592 aaKnown RBP eCLIP14.03□□□□□ -0.16
MRPL55-220ENST00000411464 TMIGD2Q96BF3 282 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 MAGEB18Q96M61 343 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 COG8Q96MW5 612 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 OR2V2Q96R30 315 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 SIGLEC11Q96RL6 698 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 SH3GL1Q99961 368 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 ECSITQ9BQ95 431 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 SSBP3Q9BWW4 388 aaPredicted RBP14.03□□□□□ -0.16
MRPL55-220ENST00000411464 POLE4Q9NR33 117 aa14.03□□□□□ -0.16
MRPL55-220ENST00000411464 TGP01266 2768 aa14.02□□□□□ -0.16
MRPL55-220ENST00000411464 ARHGAP32A7KAX9 2087 aa14.02□□□□□ -0.16
MRPL55-220ENST00000411464 PIP5K1CO60331 668 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 DOK2O60496 412 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 OMGP23515 440 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 GUCY1A3Q02108 690 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 ST3GAL3Q11203 375 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 NANOGP8Q6NSW7 305 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 SLC27A4Q6P1M0 643 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 SPATC1Q76KD6 591 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 JAZF1Q86VZ6 243 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 OR51A7Q8NH64 312 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 PTP4A1Q93096 173 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 UPRTQ96BW1 309 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 PLEKHA8Q96JA3 519 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 POFUT1Q9H488 388 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 GCM1Q9NP62 436 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 EMC7Q9NPA0 242 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 STARD10Q9Y365 291 aa14.02□□□□□ -0.17
MRPL55-220ENST00000411464 SGCEO43556 437 aa14.01□□□□□ -0.17
MRPL55-220ENST00000411464 SCG5P05408 212 aa14.01□□□□□ -0.17
MRPL55-220ENST00000411464 RPS2P15880 293 aaKnown RBP14.01□□□□□ -0.17
MRPL55-220ENST00000411464 MMP16P51512 607 aa14.01□□□□□ -0.17
MRPL55-220ENST00000411464 GNB2P62879 340 aa14.01□□□□□ -0.17
MRPL55-220ENST00000411464 RABL3Q5HYI8 236 aa14.01□□□□□ -0.17
MRPL55-220ENST00000411464 AGBL2Q5U5Z8 902 aa14.01□□□□□ -0.17
MRPL55-220ENST00000411464 C1orf94Q6P1W5 598 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms